RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 HEXIM2Q96MH2 286 aaKnown RBP6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 CHPF2Q9P2E5 772 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.3
HMGB1P10-201ENST00000395823 TCRBV16S1A1N1A0A5B0 115 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 ARNTLO00327 626 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 WIPF1O43516 503 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 EFCAB14O75071 495 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 FAM87AP0C7U9 286 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 AMPD2Q01433 879 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 FAM50AQ14320 339 aaKnown RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 ODR4Q5SWX8 454 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 CRTC3Q6UUV7 619 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 NOL8Q76FK4 1167 aaKnown RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 RAVER1Q8IY67 606 aaKnown RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 PPM1KQ8N3J5 372 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 BEND7Q8N7W2 519 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 LEO1Q8WVC0 666 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 CCDC140Q96MF4 163 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 DSCC1Q9BVC3 393 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 CHST7Q9NS84 486 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 ADAMTS8Q9UP79 889 aa6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 SF3B6Q9Y3B4 125 aaKnown RBP6.95□□□□□ -1.3
HMGB1P10-201ENST00000395823 STXBP3O00186 592 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 MEIS1O00470 390 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 CBX7O95931 251 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 CYP7A1P22680 504 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 ADMP35318 185 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 EXOSC10Q01780 885 aaKnown RBP6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 SCRN1Q12765 414 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 SFRP5Q5T4F7 317 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 STYK1Q6J9G0 422 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 KCNT2Q6UVM3 1135 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 BEND4Q6ZU67 534 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 C22orf34Q6ZV56 151 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 USP53Q70EK8 1073 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 MAMDC2Q7Z304 686 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 SHISA5Q8N114 240 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 NPLOC4Q8TAT6 608 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 JDP2Q8WYK2 163 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 COPS5Q92905 334 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 NACC1Q96RE7 527 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 HDAC8Q9BY41 377 aa6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 PRDM5Q9NQX1 630 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P10-201ENST00000395823 KPNA6O60684 536 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 CRTAMO95727 393 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 APBA3O96018 575 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 CPP00450 1065 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 ASLP04424 464 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 THBDP07204 575 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 ZNF865P0CJ78 1059 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 ITIH2P19823 946 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 PMLP29590 882 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 TNK2Q07912 1038 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 NFKBIBQ15653 356 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 ABHD17CQ6PCB6 329 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 PAOXQ6QHF9 649 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 TXNRD3Q86VQ6 643 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 FRS2Q8WU20 508 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 COX4I2Q96KJ9 171 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 TMEFF2Q9UIK5 374 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 ST14Q9Y5Y6 855 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 CAPN6Q9Y6Q1 641 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 U3KQE9 123 aa6.93□□□□□ -1.3
HMGB1P10-201ENST00000395823 ALG1L2C9J202 215 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 AURKAO14965 403 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 OPA1O60313 960 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 GSNP06396 782 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 CD3EP07766 207 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 IFNGR1P15260 489 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 KCNA6P17658 529 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 IGFALSP35858 605 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 STRN3Q13033 797 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 DDX46Q7L014 1031 aaKnown RBP6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 ATL2Q8NHH9 583 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 KCNF1Q9H3M0 494 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 GPRC5CQ9NQ84 441 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 PCDHA9Q9Y5H5 950 aa6.92□□□□□ -1.3
HMGB1P10-201ENST00000395823 JMJD7P0C870 316 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 SRFP11831 508 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 NEK4P51957 841 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 DHCR24Q15392 516 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 TESK1Q15569 626 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 SKOR2Q2VWA4 1001 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 ACBD5Q5T8D3 534 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 OGFOD3Q6PK18 319 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 CCDC103Q8IW40 242 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 MAGEB10Q96LZ2 347 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 FCRL3Q96P31 734 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 DUSP15Q9H1R2 295 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 WASHC2CQ9Y4E1 1318 aa6.91□□□□□ -1.3
HMGB1P10-201ENST00000395823 HMX2A2RU54 273 aa6.9□□□□□ -1.3
HMGB1P10-201ENST00000395823 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P10-201ENST00000395823 DHX15O43143 795 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms