RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 USP17L11C9JVI0 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L18D6R9N7 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L22D6RA61 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L17D6RBQ6 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L19D6RCP7 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L20D6RJB6 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 IRF6O14896 467 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 MRPL12P52815 198 aaKnown RBP15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 QRICH1Q2TAL8 776 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 MCTP2Q6DN12 878 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 MOB2Q70IA6 237 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 FBXO11Q86XK2 927 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 DAGLBQ8NCG7 672 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 RANBP17Q9H2T7 1088 aaKnown RBP15.71■□□□□ 0.11
VAPB-202ENST00000395802 GJB4Q9NTQ9 266 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 PCDHA1Q9Y5I3 950 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 MYPNQ86TC9 1320 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 A0A0G2JLL6 359 aaPredicted RBP15.71■□□□□ 0.1
VAPB-202ENST00000395802 SMCO2A6NFE2 343 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 SNAPC2Q13487 334 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 COG2Q14746 738 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 RILPL1Q5EBL4 403 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 PRRT2Q7Z6L0 340 aaPredicted RBP15.71■□□□□ 0.1
VAPB-202ENST00000395802 BLIDQ8IZY5 108 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 CLMNQ96JQ2 1002 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 PPP1R9AQ9ULJ8 1098 aa15.71■□□□□ 0.1
VAPB-202ENST00000395802 OTOFQ9HC10 1997 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 BTBD18B2RXH4 712 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 ZBED4O75132 1171 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
VAPB-202ENST00000395802 ADCY7P51828 1080 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 CUL5Q93034 780 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 CHAMP1Q96JM3 812 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
VAPB-202ENST00000395802 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
VAPB-202ENST00000395802 PHIPQ8WWQ0 1821 aa15.7■□□□□ 0.1
VAPB-202ENST00000395802 ZBTB48P10074 688 aaPredicted RBP15.69■□□□□ 0.1
VAPB-202ENST00000395802 CATSPERGQ6ZRH7 1159 aa15.69■□□□□ 0.1
VAPB-202ENST00000395802 HOXA7P31268 230 aaPredicted RBP15.68■□□□□ 0.1
VAPB-202ENST00000395802 GTF2A2P52657 109 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 OAZ1P54368 228 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 DNM1Q05193 864 aaKnown RBP15.68■□□□□ 0.1
VAPB-202ENST00000395802 MYSM1Q5VVJ2 828 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 CCDC194A0A1B0GVG4 234 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 ABCB11O95342 1321 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 ICAM1P05362 532 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 TRAPPC10P48553 1259 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 FOXD4L6Q3SYB3 417 aaPredicted RBP15.68■□□□□ 0.1
VAPB-202ENST00000395802 FOXD4L3Q6VB84 417 aaPredicted RBP15.68■□□□□ 0.1
VAPB-202ENST00000395802 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
VAPB-202ENST00000395802 COA7Q96BR5 231 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 SLC38A10Q9HBR0 1119 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 RIC8AQ9NPQ8 531 aa15.68■□□□□ 0.1
VAPB-202ENST00000395802 MRPL11Q9Y3B7 192 aaKnown RBP15.68■□□□□ 0.1
VAPB-202ENST00000395802 TOMM70O94826 608 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 CETPP11597 493 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 DSG3P32926 999 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 HUNKP57058 714 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 CST9Q5W186 159 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 GADL1Q6ZQY3 521 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 KRT25Q7Z3Z0 450 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 MB21D1Q8N884 522 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 CEP131Q9UPN4 1083 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 AGTPBP1Q9UPW5 1226 aa15.67■□□□□ 0.1
VAPB-202ENST00000395802 PASKQ96RG2 1323 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 KIF28PB7ZC32 967 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 KIF3CO14782 793 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 IRX3P78415 501 aaPredicted RBP15.66■□□□□ 0.1
VAPB-202ENST00000395802 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
VAPB-202ENST00000395802 SAMD3Q8N6K7 520 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 POLR3EQ9NVU0 708 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 VWA5AO00534 786 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 TRAK2O60296 914 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 PPP1R11O60927 126 aaPredicted RBP15.66■□□□□ 0.1
VAPB-202ENST00000395802 BMP15O95972 392 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 OSBPP22059 807 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.1
VAPB-202ENST00000395802 NR5A1Q13285 461 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 NPY5RQ15761 445 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 USH1GQ495M9 461 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 MCF2L2Q86YR7 1114 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 GTF3C2Q8WUA4 911 aaPredicted RBP15.66■□□□□ 0.1
VAPB-202ENST00000395802 WNK4Q96J92 1243 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 SPATA32Q96LK8 384 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 MAF1Q9H063 256 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 MAP3K20Q9NYL2 800 aaKnown RBP15.66■□□□□ 0.1
VAPB-202ENST00000395802 CCPG1Q9ULG6 757 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
VAPB-202ENST00000395802 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 ELP1O95163 1332 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 FOSP01100 380 aaPredicted RBP15.65■□□□□ 0.1
VAPB-202ENST00000395802 FSTL1Q12841 308 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms