RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TSPY2A6NKD2 308 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 POTEB2H3BUK9 544 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 STAT2P52630 851 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 ACLYP53396 1101 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 SNAP25P60880 206 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 ACVR2BQ13705 512 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 ARMCX2Q7L311 632 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 CHST13Q8NET6 341 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 AGBL1Q96MI9 1066 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 FBXO40Q9UH90 709 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 SYNPO2Q9UMS6 1093 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 TACC3Q9Y6A5 838 aa22.85■■□□□ 1.25
COL11A2-204ENST00000395194 C6orf222P0C671 652 aaPredicted RBP22.84■■□□□ 1.25
COL11A2-204ENST00000395194 SLC1A4P43007 532 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 CNTN2Q02246 1040 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 KCNA10Q16322 511 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 CCDC144BQ3MJ40 725 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 ZNF697Q5TEC3 545 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 CCDC174Q6PII3 467 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 ZNF467Q7Z7K2 595 aaPredicted RBP22.84■■□□□ 1.25
COL11A2-204ENST00000395194 RNF146Q9NTX7 359 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.84■■□□□ 1.25
COL11A2-204ENST00000395194 LCTP09848 1927 aa22.84■■□□□ 1.25
COL11A2-204ENST00000395194 LRRC37A2A6NM11 1700 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 RANBP6O60518 1105 aaKnown RBP22.83■■□□□ 1.25
COL11A2-204ENST00000395194 RAG1P15918 1043 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 OAZ1P54368 228 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.83■■□□□ 1.25
COL11A2-204ENST00000395194 CCDC144CPQ8IYA2 1237 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 KLHDC9Q8NEP7 349 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 TSEN34Q9BSV6 310 aaKnown RBP22.83■■□□□ 1.25
COL11A2-204ENST00000395194 ACAD9Q9H845 621 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 IL17RBQ9NRM6 502 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 TMEM39AQ9NV64 488 aa22.83■■□□□ 1.25
COL11A2-204ENST00000395194 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.25
COL11A2-204ENST00000395194 ZNF536O15090 1300 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 DUSP11O75319 330 aaKnown RBP22.82■■□□□ 1.24
COL11A2-204ENST00000395194 ALAS1P13196 640 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 EPHB4P54760 987 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 FAM109BQ6ICB4 259 aaPredicted RBP22.82■■□□□ 1.24
COL11A2-204ENST00000395194 FAM160B2Q86V87 743 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 CHURC1Q8WUH1 139 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 STAG1Q8WVM7 1258 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 GMCL1Q96IK5 515 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 ABHD16BQ9H3Z7 469 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 A1CFQ9NQ94 594 aaKnown RBP22.82■■□□□ 1.24
COL11A2-204ENST00000395194 TOMM22Q9NS69 142 aa22.82■■□□□ 1.24
COL11A2-204ENST00000395194 NUP133Q8WUM0 1156 aa22.81■■□□□ 1.24
COL11A2-204ENST00000395194 VTI1AQ96AJ9 217 aa22.81■■□□□ 1.24
COL11A2-204ENST00000395194 MOXD2PA6NHM9 499 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 KIAA0355O15063 1070 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 ASGR1P07306 291 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 PDE1AP54750 535 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 FAAP100Q0VG06 881 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 CCDC96Q2M329 555 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 RRP12Q5JTH9 1297 aaKnown RBP22.8■■□□□ 1.24
COL11A2-204ENST00000395194 CCSAPQ6IQ19 270 aaPredicted RBP22.8■■□□□ 1.24
COL11A2-204ENST00000395194 EVI5LQ96CN4 794 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 RNPC3Q96LT9 517 aaKnown RBP22.8■■□□□ 1.24
COL11A2-204ENST00000395194 FAM227BQ96M60 508 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 TRERF1Q96PN7 1200 aa22.8■■□□□ 1.24
COL11A2-204ENST00000395194 A0A0D9SFI3 127 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.79■■□□□ 1.24
COL11A2-204ENST00000395194 DCDC2CA8MYV0 355 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 FDX1P10109 184 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
COL11A2-204ENST00000395194 FAM133AQ8N9E0 248 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 GLT1D1Q96MS3 346 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 KATNBL1Q9H079 304 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 SPC25Q9HBM1 224 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 PRR12Q9ULL5 1215 aa22.79■■□□□ 1.24
COL11A2-204ENST00000395194 SOWAHBA6NEL2 793 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 PTGS1P23219 599 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 BEX3Q00994 111 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 FPGSQ05932 587 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 MYO9BQ13459 2157 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 MUM1L1Q5H9M0 696 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 GNASQ5JWF2 1037 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 RCSD1Q6JBY9 416 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 ANKRD33Q7Z3H0 272 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 PRUNE2Q8WUY3 3088 aa22.78■■□□□ 1.24
COL11A2-204ENST00000395194 CST5P28325 142 aaPredicted RBP22.77■■□□□ 1.24
COL11A2-204ENST00000395194 GJA9P57773 515 aa22.77■■□□□ 1.24
COL11A2-204ENST00000395194 PPP4R3BQ5MIZ7 849 aa22.77■■□□□ 1.24
COL11A2-204ENST00000395194 PCSK9Q8NBP7 692 aaKnown RBP22.77■■□□□ 1.24
COL11A2-204ENST00000395194 TOX2Q96NM4 488 aa22.77■■□□□ 1.24
COL11A2-204ENST00000395194 UPF3AQ9H1J1 476 aaKnown RBP22.77■■□□□ 1.24
COL11A2-204ENST00000395194 HELLSQ9NRZ9 838 aa22.77■■□□□ 1.24
COL11A2-204ENST00000395194 ANAPC4Q9UJX5 808 aa22.77■■□□□ 1.24
COL11A2-204ENST00000395194 CCPG1Q9ULG6 757 aa22.77■■□□□ 1.24
COL11A2-204ENST00000395194 SLC16A2P36021 539 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 HAND2P61296 217 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 TTBK2Q6IQ55 1244 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 NSMFQ6X4W1 530 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 EEPD1Q7L9B9 569 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 PURBQ96QR8 312 aaKnown RBP22.76■■□□□ 1.23
COL11A2-204ENST00000395194 CDX2Q99626 313 aaPredicted RBP22.76■■□□□ 1.23
COL11A2-204ENST00000395194 LNPKQ9C0E8 428 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 TTYH1Q9H313 450 aaPredicted RBP22.76■■□□□ 1.23
COL11A2-204ENST00000395194 SEMA6BQ9H3T3 888 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms