RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 FOXP4Q8IVH2 680 aaPredicted RBP9.83□□□□□ -0.84
RTN4-206ENST00000394611 CTAGE1Q96RT6 745 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
RTN4-206ENST00000394611 IFIH1Q9BYX4 1025 aaKnown RBP9.83□□□□□ -0.84
RTN4-206ENST00000394611 MLXIPLQ9NP71 852 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 TJP1Q07157 1748 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 A0A1W2PQ27 194 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 A0A1W2PQ64 194 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 A0A1W2PQD8 194 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 CYP19A1P11511 503 aaPredicted RBP9.83□□□□□ -0.84
RTN4-206ENST00000394611 RASSF7Q02833 373 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 IKQ13123 557 aaPredicted RBP9.83□□□□□ -0.84
RTN4-206ENST00000394611 CATIPQ7Z7H3 387 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 NELFCDQ8IXH7 590 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 OR2W6PQ8NHA6 318 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 ZNF274Q96GC6 653 aaPredicted RBP9.83□□□□□ -0.84
RTN4-206ENST00000394611 EPB41L5Q9HCM4 733 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 LY75O60449 1722 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 ZNF609O15014 1411 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 ANKRD62A6NC57 917 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 OPA1O60313 960 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 KLK7P49862 253 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 PTGDRQ13258 359 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 LETM2Q2VYF4 491 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 MCTP2Q6DN12 878 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 NFRKBQ6P4R8 1299 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 MMS22LQ6ZRQ5 1243 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 TMTC1Q8IUR5 882 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 CCDC170Q8IYT3 715 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 KRT12Q99456 494 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 CPVLQ9H3G5 476 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 GOLPH3Q9H4A6 298 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 EXOC1Q9NV70 894 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 PSMA7O14818 248 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 KRT13P13646 458 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 SSR1P43307 286 aaKnown RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 SLCO1A2P46721 670 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 EHHADHQ08426 723 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 PDE4DQ08499 809 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 KRT31Q15323 416 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 NBPF14Q5TI25 921 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 NBPF10Q6P3W6 841 aaKnown RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 MICALCLQ6ZW33 695 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 CTNNBL1Q8WYA6 563 aaPredicted RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 MS4A14Q96JA4 679 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 PPP1R12CQ9BZL4 782 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 ODF2LQ9ULJ1 636 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 PLSCR1O15162 318 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 CEP104O60308 925 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 SCP2P22307 547 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 MAGEA1P43355 309 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 CRKLP46109 303 aaKnown RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 PDIA6Q15084 440 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 IQCA1Q86XH1 822 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 TBC1D10CQ8IV04 446 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 CXorf56Q9H5V9 222 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 HELLSQ9NRZ9 838 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 ZBTB1Q9Y2K1 713 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 CEP83Q9Y592 693 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 IKBKBO14920 756 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 ZRANB2O95218 330 aaKnown RBP eCLIP9.82□□□□□ -0.84
RTN4-206ENST00000394611 STARD3NLO95772 234 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 HOXB7P09629 217 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 CCDC172P0C7W6 258 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 COPB1P53618 953 aaKnown RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 NNTQ13423 1086 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 FAM133BQ5BKY9 247 aaKnown RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 BEND6Q5SZJ8 279 aaPredicted RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 EFCAB13Q8IY85 973 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 UPF1Q92900 1129 aaKnown RBP eCLIP9.82□□□□□ -0.848e-30■■□□□ 13.3
RTN4-206ENST00000394611 TEX13AQ9BXU3 409 aaPredicted RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 ANKZF1Q9H8Y5 726 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 A0A087WUV0 522 aaPredicted RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 ZSCAN5CA6NGD5 496 aaPredicted RBP9.82□□□□□ -0.84
RTN4-206ENST00000394611 MFAP3LO75121 409 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 MCM3P25205 808 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 LRRC41Q15345 812 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 NBPF9Q3BBW0 867 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 KRT71Q3SY84 523 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 IQUBQ8NA54 791 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 OR8K1Q8NGG5 319 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 APPBP2Q92624 585 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 SLC39A2Q9NP94 309 aa9.82□□□□□ -0.84
RTN4-206ENST00000394611 NDUFA10O95299 355 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 TUBB4AP04350 444 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 PHKA1P46020 1223 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 PLCD1P51178 756 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 EIF6P56537 245 aaKnown RBP9.81□□□□□ -0.84
RTN4-206ENST00000394611 KRT83P78385 493 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 CUL4BQ13620 913 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 ZKSCAN8Q15776 578 aaPredicted RBP9.81□□□□□ -0.84
RTN4-206ENST00000394611 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 CAMKK2Q96RR4 588 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 MYH14Q7Z406 1995 aaKnown RBP9.81□□□□□ -0.84
RTN4-206ENST00000394611 CCDC196A0A1B0GTZ2 297 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 KRT2P35908 639 aa9.81□□□□□ -0.84
RTN4-206ENST00000394611 BAG6P46379 1132 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms