RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 RASGRP2Q7LDG7 609 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 SLC44A5Q8NCS7 719 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-204ENST00000394601 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 RNF225M0QZC1 329 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-204ENST00000394601 FAM182BQ5T319 152 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 RAD9BQ6WBX8 426 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 BLIDQ8IZY5 108 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 RASGRP4Q8TDF6 673 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 GPR101Q96P66 508 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-204ENST00000394601 PCDHA6Q9UN73 950 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 PCDHA8Q9Y5H6 950 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 CDC25AP30304 524 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 GRAPQ13588 217 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 DAGLBQ8NCG7 672 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 GRAPLQ8TC17 118 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-204ENST00000394601 MYCBPQ99417 103 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-204ENST00000394601 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
PTBP1-204ENST00000394601 SOWAHDA6NJG2 315 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 GYPCP04921 128 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 KLHL10Q6JEL2 608 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 TMEM60Q9H2L4 133 aa17.48■□□□□ 0.39
PTBP1-204ENST00000394601 EFCAB8A8MWE9 144 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 ZMYND10O75800 440 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 PDE6BP35913 854 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 IRF2BP1Q8IU81 584 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 RIN2Q8WYP3 895 aaPredicted RBP17.47■□□□□ 0.39
PTBP1-204ENST00000394601 LIMA1Q9UHB6 759 aaKnown RBP17.47■□□□□ 0.39
PTBP1-204ENST00000394601 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
PTBP1-204ENST00000394601 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
PTBP1-204ENST00000394601 STXBP3O00186 592 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 RASA1P20936 1047 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 DZIP1Q86YF9 867 aaKnown RBP17.47■□□□□ 0.39
PTBP1-204ENST00000394601 IQUBQ8NA54 791 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
PTBP1-204ENST00000394601 LRRC37AA6NMS7 1700 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
PTBP1-204ENST00000394601 NT5C2P49902 561 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 SPTY2D1Q68D10 685 aaPredicted RBP17.46■□□□□ 0.39
PTBP1-204ENST00000394601 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 KIF5BP33176 963 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 LONP1P36776 959 aaKnown RBP17.46■□□□□ 0.39
PTBP1-204ENST00000394601 NOVP48745 357 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 WDR66Q8TBY9 1149 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 KAT14Q9H8E8 782 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 RWDD2AQ9UIY3 292 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 AKR1B15C9JRZ8 316 aaPredicted RBP17.46■□□□□ 0.39
PTBP1-204ENST00000394601 KLRC4O43908 158 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
PTBP1-204ENST00000394601 FXR1P51114 621 aaKnown RBP eCLIP17.46■□□□□ 0.39
PTBP1-204ENST00000394601 KRT31Q15323 416 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 TMEM47Q9BQJ4 181 aa17.46■□□□□ 0.39
PTBP1-204ENST00000394601 MFAP3LO75121 409 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 MUM1L1Q5H9M0 696 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
PTBP1-204ENST00000394601 PP2D1A8MPX8 630 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 IGSF22Q8N9C0 903 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 GOLGA1Q92805 767 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 CENPHQ9H3R5 247 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 ADGRG1Q9Y653 693 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 FLT1P17948 1338 aa17.45■□□□□ 0.38
PTBP1-204ENST00000394601 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
PTBP1-204ENST00000394601 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 ABCB6Q9NP58 842 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 CALML3P27482 149 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 PMS1P54277 932 aaKnown RBP17.44■□□□□ 0.38
PTBP1-204ENST00000394601 GPSM2P81274 684 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 DISC1Q9NRI5 854 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 GDAQ9Y2T3 454 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 H0YHG0 523 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 PRCPP42785 496 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 CHMP4BP1P59074 171 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 FBXW10Q5XX13 1052 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
PTBP1-204ENST00000394601 RPN1P04843 607 aaKnown RBP17.43■□□□□ 0.38
PTBP1-204ENST00000394601 IL1R1P14778 569 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 CASP14P31944 242 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 PIP4K2BP78356 416 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 FAM204AQ9H8W3 233 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 ABL1P00519 1130 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 RHBDL3P58872 404 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 PRR5LQ6MZQ0 368 aa17.43■□□□□ 0.38
PTBP1-204ENST00000394601 RSRC2Q7L4I2 434 aaKnown RBP17.43■□□□□ 0.38
PTBP1-204ENST00000394601 GPR161Q8N6U8 529 aaKnown RBP17.43■□□□□ 0.38
PTBP1-204ENST00000394601 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 EDIL3O43854 480 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 USP5P45974 858 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms