RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 COA7Q96BR5 231 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 ANO10Q9NW15 660 aa17.06■□□□□ 0.32
CCT4-201ENST00000394440 NDUFB10O96000 172 aa17.05■□□□□ 0.32
CCT4-201ENST00000394440 ZBTB21Q9ULJ3 1066 aa17.05■□□□□ 0.32
CCT4-201ENST00000394440 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
CCT4-201ENST00000394440 IQCB1Q15051 598 aa17.05■□□□□ 0.32
CCT4-201ENST00000394440 MYH7BA7E2Y1 1941 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 A0A087WWV3 80 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
CCT4-201ENST00000394440 AP5Z1O43299 807 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 MDM2Q00987 491 aaPredicted RBP17.04■□□□□ 0.32
CCT4-201ENST00000394440 NONOQ15233 471 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCT4-201ENST00000394440 IL17AQ16552 155 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
CCT4-201ENST00000394440 POLR2DO15514 142 aaKnown RBP17.04■□□□□ 0.32
CCT4-201ENST00000394440 ACTN4O43707 911 aaKnown RBP17.04■□□□□ 0.32
CCT4-201ENST00000394440 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 CNNM3Q8NE01 707 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 SYMPKQ92797 1274 aaKnown RBP17.04■□□□□ 0.32
CCT4-201ENST00000394440 EPSTI1Q96J88 318 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 TEPSINQ96N21 525 aa17.04■□□□□ 0.32
CCT4-201ENST00000394440 A0A087X0B3 334 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 VWA3AA6NCI4 1184 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 TNNI2P48788 182 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 ADCY7P51828 1080 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 CLK2P49760 499 aaKnown RBP17.03■□□□□ 0.32
CCT4-201ENST00000394440 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
CCT4-201ENST00000394440 CAP2P40123 477 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 ECE1P42892 770 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 PNOCQ13519 176 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 RASA3Q14644 834 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 TMEM60Q9H2L4 133 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
CCT4-201ENST00000394440 LAD1O00515 517 aa17.02■□□□□ 0.31
CCT4-201ENST00000394440 NLRP12P59046 1061 aa17.02■□□□□ 0.31
CCT4-201ENST00000394440 TNFAIP1Q13829 316 aa17.02■□□□□ 0.31
CCT4-201ENST00000394440 DPCR1Q3MIW9 517 aa17.02■□□□□ 0.31
CCT4-201ENST00000394440 NEK8Q86SG6 692 aa17.02■□□□□ 0.31
CCT4-201ENST00000394440 NUP88Q99567 741 aaPredicted RBP17.02■□□□□ 0.31
CCT4-201ENST00000394440 TMEM260Q9NX78 707 aa17.02■□□□□ 0.31
CCT4-201ENST00000394440 BIN2Q9UBW5 565 aaPredicted RBP17.02■□□□□ 0.31
CCT4-201ENST00000394440 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.31
CCT4-201ENST00000394440 FOXN1O15353 648 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 RAD21O60216 631 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 ADCY5O95622 1261 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 BMP3P12645 472 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 PRPHP41219 470 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
CCT4-201ENST00000394440 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
CCT4-201ENST00000394440 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 CEP57L1Q8IYX8 460 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 ACER1Q8TDN7 264 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 EDIL3O43854 480 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 LONP1P36776 959 aaKnown RBP17.01■□□□□ 0.31
CCT4-201ENST00000394440 JAKMIP3Q5VZ66 844 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 PDILTQ8N807 584 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 GJA3Q9Y6H8 435 aa17.01■□□□□ 0.31
CCT4-201ENST00000394440 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
CCT4-201ENST00000394440 POSTNQ15063 836 aa17■□□□□ 0.31
CCT4-201ENST00000394440 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
CCT4-201ENST00000394440 NT5DC1Q5TFE4 455 aa17■□□□□ 0.31
CCT4-201ENST00000394440 SH3RF1Q7Z6J0 888 aa17■□□□□ 0.31
CCT4-201ENST00000394440 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
CCT4-201ENST00000394440 TRIM44Q96DX7 344 aaPredicted RBP17■□□□□ 0.31
CCT4-201ENST00000394440 BPIFA3Q9BQP9 254 aa17■□□□□ 0.31
CCT4-201ENST00000394440 PCDHA5Q9Y5H7 936 aa17■□□□□ 0.31
CCT4-201ENST00000394440 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
CCT4-201ENST00000394440 ASTN2O75129 1339 aaPredicted RBP17■□□□□ 0.31
CCT4-201ENST00000394440 E2F4Q16254 413 aa17■□□□□ 0.31
CCT4-201ENST00000394440 HS1BP3Q53T59 392 aa17■□□□□ 0.31
CCT4-201ENST00000394440 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
CCT4-201ENST00000394440 KANK3Q6NY19 840 aa17■□□□□ 0.31
CCT4-201ENST00000394440 KIF4BQ2VIQ3 1234 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 SPATA20Q8TB22 786 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 CUL5Q93034 780 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 HOOK1Q9UJC3 728 aaKnown RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 BIN1O00499 593 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 SLFN14P0C7P3 912 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 SARSP49591 514 aaKnown RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 LETM2Q2VYF4 491 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 ZNF784Q8NCA9 323 aaPredicted RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
CCT4-201ENST00000394440 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
CCT4-201ENST00000394440 ASNSP08243 561 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 DHX58Q96C10 678 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 VCPKMTQ9H867 229 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms