RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CDCA7Q9BWT1 371 aaPredicted RBP21.04■□□□□ 0.96
HOXC6-202ENST00000394331 NID2Q14112 1375 aa21.04■□□□□ 0.96
HOXC6-202ENST00000394331 EPHB4P54760 987 aa21.04■□□□□ 0.96
HOXC6-202ENST00000394331 INTS5Q6P9B9 1019 aaKnown RBP21.04■□□□□ 0.96
HOXC6-202ENST00000394331 TMTC2Q8N394 836 aa21.04■□□□□ 0.96
HOXC6-202ENST00000394331 ARMC2Q8NEN0 867 aa21.04■□□□□ 0.96
HOXC6-202ENST00000394331 ARAP2Q8WZ64 1704 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 ADCY2Q08462 1091 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 SAFBQ15424 915 aaKnown RBP eCLIP21.03■□□□□ 0.96
HOXC6-202ENST00000394331 CYB5D1Q6P9G0 228 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 KRI1Q8N9T8 703 aaKnown RBP21.03■□□□□ 0.96
HOXC6-202ENST00000394331 CPLX3Q8WVH0 158 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 MYL10Q9BUA6 226 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 INCENPQ9NQS7 918 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 SEC31BQ9NQW1 1179 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 RTL9Q8NET4 1388 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 SND1Q7KZF4 910 aaKnown RBP eCLIP21.03■□□□□ 0.96
HOXC6-202ENST00000394331 TRIM22Q8IYM9 498 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 ZNF483Q8TF39 744 aaPredicted RBP21.03■□□□□ 0.96
HOXC6-202ENST00000394331 GDAP1L1Q96MZ0 367 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 SH3GL3Q99963 347 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
HOXC6-202ENST00000394331 SLC4A4Q9Y6R1 1079 aa21.03■□□□□ 0.96
HOXC6-202ENST00000394331 FOXN1O15353 648 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 ATP1A1P05023 1023 aaKnown RBP21.02■□□□□ 0.96
HOXC6-202ENST00000394331 RUFY1Q96T51 708 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 BCL9LQ86UU0 1499 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 ERICH2A1L162 156 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 HSF2BPO75031 334 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 PTGISQ16647 500 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 GSPT2Q8IYD1 628 aaKnown RBP21.02■□□□□ 0.96
HOXC6-202ENST00000394331 FUKQ8N0W3 1084 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 RABEP2Q9H5N1 569 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 SLC24A3Q9HC58 644 aa21.02■□□□□ 0.96
HOXC6-202ENST00000394331 SNAP23O00161 211 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 PPP1R37O75864 691 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 FAM107AO95990 144 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 RCAN1P53805 252 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 JAKMIP2Q96AA8 810 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 HOOK2Q96ED9 719 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 REXO2Q9Y3B8 237 aaKnown RBP21.01■□□□□ 0.95
HOXC6-202ENST00000394331 NDUFA10O95299 355 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 BCAMP50895 628 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 WTAPQ15007 396 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 FAM228AQ86W67 206 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 NOSTRINQ8IVI9 506 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 TATDN2Q93075 761 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 SYNRGQ9UMZ2 1314 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 MYO5AQ9Y4I1 1855 aaKnown RBP21.01■□□□□ 0.95
HOXC6-202ENST00000394331 CRKLP46109 303 aaKnown RBP21.01■□□□□ 0.95
HOXC6-202ENST00000394331 RTN1Q16799 776 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 LCORLQ8N3X6 602 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 SPATS2LQ9NUQ6 558 aaKnown RBP21.01■□□□□ 0.95
HOXC6-202ENST00000394331 LRP2BPQ9P2M1 347 aa21.01■□□□□ 0.95
HOXC6-202ENST00000394331 IQSEC3Q9UPP2 1182 aaPredicted RBP21.01■□□□□ 0.95
HOXC6-202ENST00000394331 EPN1Q9Y6I3 576 aaPredicted RBP21.01■□□□□ 0.95
HOXC6-202ENST00000394331 PLCH1Q4KWH8 1693 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 SLIT2O94813 1529 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 CAMTA2O94983 1202 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 CUL4BQ13620 913 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 NBPF9Q3BBW0 867 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 RRP12Q5JTH9 1297 aaKnown RBP21■□□□□ 0.95
HOXC6-202ENST00000394331 MYCBPAPQ8TBZ2 947 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 ARL8AQ96BM9 186 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 SLF1Q9BQI6 1058 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 HDAC6Q9UBN7 1215 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 ECM29Q5VYK3 1845 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 LRRC10BA6NIK2 292 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 PRKAB2O43741 272 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 CD302Q8IX05 232 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
HOXC6-202ENST00000394331 ZNF579Q8NAF0 562 aaKnown RBP21■□□□□ 0.95
HOXC6-202ENST00000394331 P3H4Q92791 437 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 TAOK2Q9UL54 1235 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 GUCA1BQ9UMX6 200 aa21■□□□□ 0.95
HOXC6-202ENST00000394331 KAT6BQ8WYB5 2073 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 MMP1P03956 469 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 SSR1P43307 286 aaKnown RBP20.99■□□□□ 0.95
HOXC6-202ENST00000394331 CCNHP51946 323 aaPredicted RBP20.99■□□□□ 0.95
HOXC6-202ENST00000394331 RNF187Q5TA31 235 aaPredicted RBP20.99■□□□□ 0.95
HOXC6-202ENST00000394331 NLRP14Q86W24 1093 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 TACC3Q9Y6A5 838 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 ZMYND10O75800 440 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 TTC19Q6DKK2 380 aaPredicted RBP20.99■□□□□ 0.95
HOXC6-202ENST00000394331 CCT8L2Q96SF2 557 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 LIMA1Q9UHB6 759 aaKnown RBP20.99■□□□□ 0.95
HOXC6-202ENST00000394331 TIAM2Q8IVF5 1701 aa20.99■□□□□ 0.95
HOXC6-202ENST00000394331 FOXP1Q9H334 677 aaPredicted RBP20.98■□□□□ 0.95
HOXC6-202ENST00000394331 HOMER3Q9NSC5 361 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 IRF6O14896 467 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 DEXIO95424 95 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 AP1ARQ63HQ0 302 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 CEP57Q86XR8 500 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 RSRC1Q96IZ7 334 aaKnown RBP20.98■□□□□ 0.95
HOXC6-202ENST00000394331 CCDC114Q96M63 670 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 NIP7Q9Y221 180 aaKnown RBP eCLIP20.98■□□□□ 0.95
HOXC6-202ENST00000394331 DOCK2Q92608 1830 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 NTSR2O95665 410 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 ATP2B2Q01814 1243 aa20.98■□□□□ 0.95
HOXC6-202ENST00000394331 CHRNDQ07001 517 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms