RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 AXDND1Q5T1B0 1012 aaPredicted RBP23.25■■□□□ 1.31
HDDC3-202ENST00000394272 BICD2Q8TD16 824 aa23.25■■□□□ 1.31
HDDC3-202ENST00000394272 SYAP1Q96A49 352 aaPredicted RBP23.25■■□□□ 1.31
HDDC3-202ENST00000394272 A0A1W2PQ27 194 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 A0A1W2PQ64 194 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 A0A1W2PQD8 194 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 TRIM75PA6NK02 468 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 ZSCAN23Q3MJ62 389 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 JMYQ8N9B5 988 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 CHURC1Q8WUH1 139 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 AS3MTQ9HBK9 375 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 SMCHD1A6NHR9 2005 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 WDR46O15213 610 aaKnown RBP23.24■■□□□ 1.31
HDDC3-202ENST00000394272 ATP2B1P20020 1258 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 MARCKSP29966 332 aaPredicted RBP23.24■■□□□ 1.31
HDDC3-202ENST00000394272 PNMA8AQ86V59 439 aaPredicted RBP23.24■■□□□ 1.31
HDDC3-202ENST00000394272 FAM160B2Q86V87 743 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 ZNF280CQ8ND82 737 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 FEM1BQ9UK73 627 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 CEP131Q9UPN4 1083 aa23.24■■□□□ 1.31
HDDC3-202ENST00000394272 CCDC194A0A1B0GVG4 234 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 ADCY7P51828 1080 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 SPP2Q13103 211 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 MTMR2Q13614 643 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 TTC38Q5R3I4 469 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 REXO1Q8N1G1 1221 aaKnown RBP23.23■■□□□ 1.31
HDDC3-202ENST00000394272 AMNQ9BXJ7 453 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 EMILIN3Q9NT22 766 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 PCDHA1Q9Y5I3 950 aa23.23■■□□□ 1.31
HDDC3-202ENST00000394272 USP14P54578 494 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 BACE1P56817 501 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 SNAP25P60880 206 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 PRKG1Q13976 671 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.22■■□□□ 1.31
HDDC3-202ENST00000394272 CCAR1Q8IX12 1150 aaKnown RBP23.22■■□□□ 1.31
HDDC3-202ENST00000394272 CDCA5Q96FF9 252 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 PPP1R12BO60237 982 aaPredicted RBP23.22■■□□□ 1.31
HDDC3-202ENST00000394272 EAPPQ56P03 285 aaPredicted RBP23.22■■□□□ 1.31
HDDC3-202ENST00000394272 CCDC183Q5T5S1 534 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 KRT25Q7Z3Z0 450 aa23.22■■□□□ 1.31
HDDC3-202ENST00000394272 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
HDDC3-202ENST00000394272 BMP15O95972 392 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 CLK2P49760 499 aaKnown RBP23.21■■□□□ 1.31
HDDC3-202ENST00000394272 MAP3K9P80192 1104 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 DGKZQ13574 1117 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 FBXO11Q86XK2 927 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 GOLPH3LQ9H4A5 285 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 FBXO28Q9NVF7 368 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 ZHX2Q9Y6X8 837 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 PARP14Q460N5 1801 aa23.21■■□□□ 1.31
HDDC3-202ENST00000394272 NR1I2O75469 434 aa23.2■■□□□ 1.3
HDDC3-202ENST00000394272 ZNF445P59923 1031 aa23.2■■□□□ 1.3
HDDC3-202ENST00000394272 VGLL4Q14135 290 aa23.2■■□□□ 1.3
HDDC3-202ENST00000394272 MRPS27Q92552 414 aaKnown RBP23.2■■□□□ 1.3
HDDC3-202ENST00000394272 CUL5Q93034 780 aa23.2■■□□□ 1.3
HDDC3-202ENST00000394272 DACT1Q9NYF0 836 aa23.2■■□□□ 1.3
HDDC3-202ENST00000394272 BIN2Q9UBW5 565 aaPredicted RBP23.2■■□□□ 1.3
HDDC3-202ENST00000394272 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
HDDC3-202ENST00000394272 VCAM1P19320 739 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 PTPREP23469 700 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 INF2Q27J81 1249 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 KRI1Q8N9T8 703 aaKnown RBP23.19■■□□□ 1.3
HDDC3-202ENST00000394272 FSIP1Q8NA03 581 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 KIFC2Q96AC6 838 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 C12orf42Q96LP6 360 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 GLT8D2Q9H1C3 349 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 PSTPIP2Q9H939 334 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 FBXO2Q9UK22 296 aaPredicted RBP23.19■■□□□ 1.3
HDDC3-202ENST00000394272 PTPRFP10586 1907 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 CUTAO60888 179 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 CMA1P23946 247 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 MRPL12P52815 198 aaKnown RBP23.19■■□□□ 1.3
HDDC3-202ENST00000394272 NONOQ15233 471 aaKnown RBP eCLIP23.19■■□□□ 1.3
HDDC3-202ENST00000394272 ZNF174Q15697 407 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 JAKMIP3Q5VZ66 844 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 ENGASEQ8NFI3 743 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
HDDC3-202ENST00000394272 SNW1Q13573 536 aaKnown RBP23.18■■□□□ 1.3
HDDC3-202ENST00000394272 DDX19AQ9NUU7 478 aaKnown RBP23.18■■□□□ 1.3
HDDC3-202ENST00000394272 TMEM260Q9NX78 707 aa23.18■■□□□ 1.3
HDDC3-202ENST00000394272 SRPRBQ9Y5M8 271 aaKnown RBP23.18■■□□□ 1.3
HDDC3-202ENST00000394272 C19orf81C9J6K1 198 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 NF2P35240 595 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 ATP2C1P98194 919 aaPredicted RBP23.17■■□□□ 1.3
HDDC3-202ENST00000394272 FAM160A1Q05DH4 1040 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 SHC4Q6S5L8 630 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 CCDC73Q6ZRK6 1079 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 CLIC6Q96NY7 704 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 MRVI1Q9Y6F6 885 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 RLFQ13129 1914 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 IREB2P48200 963 aaKnown RBP23.17■■□□□ 1.3
HDDC3-202ENST00000394272 USH1GQ495M9 461 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 PRPF38AQ8NAV1 312 aaKnown RBP23.17■■□□□ 1.3
HDDC3-202ENST00000394272 SLF1Q9BQI6 1058 aa23.17■■□□□ 1.3
HDDC3-202ENST00000394272 MYH7BA7E2Y1 1941 aa23.16■■□□□ 1.3
HDDC3-202ENST00000394272 FAM237AA0A1B0GTK4 181 aa23.16■■□□□ 1.3
HDDC3-202ENST00000394272 SYCE3A1L190 88 aa23.16■■□□□ 1.3
HDDC3-202ENST00000394272 TRAF1Q13077 416 aa23.16■■□□□ 1.3
HDDC3-202ENST00000394272 PTGDRQ13258 359 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms