RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 ITGB8P26012 769 aa20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 TKFCQ3LXA3 575 aa20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 PCSK9Q8NBP7 692 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 STAG1Q8WVM7 1258 aa20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 UPF3AQ9H1J1 476 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 SPC25Q9HBM1 224 aa20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 ZHX1Q9UKY1 873 aaPredicted RBP20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.77■□□□□ 0.92
SNRPA1-202ENST00000394082 EYSQ5T1H1 3165 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 TMEM265A0A087WTH1 108 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 DCDC2CA8MYV0 355 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 RAG1P15918 1043 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 NOVP48745 357 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 GJA9P57773 515 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 FAAP100Q0VG06 881 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 KCNA10Q16322 511 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 FAM133AQ8N9E0 248 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 LENG1Q96BZ8 264 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 GLT1D1Q96MS3 346 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 ACAD9Q9H845 621 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 TMEM39AQ9NV64 488 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 ANAPC4Q9UJX5 808 aa20.76■□□□□ 0.91
SNRPA1-202ENST00000394082 TMEM232C9JQI7 657 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 FOXP2O15409 715 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 PQBP1O60828 265 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 SLC1A4P43007 532 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 CDK7P50613 346 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 CCDC144BQ3MJ40 725 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 ARMCX2Q7L311 632 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 KATNBL1Q9H079 304 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 ZNF536O15090 1300 aa20.75■□□□□ 0.91
SNRPA1-202ENST00000394082 CDH23Q9H251 3354 aa20.74■□□□□ 0.91
SNRPA1-202ENST00000394082 FGRP09769 529 aa20.74■□□□□ 0.91
SNRPA1-202ENST00000394082 CCDC144CPQ8IYA2 1237 aa20.74■□□□□ 0.91
SNRPA1-202ENST00000394082 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
SNRPA1-202ENST00000394082 CUL9Q8IWT3 2517 aa20.74■□□□□ 0.91
SNRPA1-202ENST00000394082 TSPY2A6NKD2 308 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 SLC4A3P48751 1232 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 FPGSQ05932 587 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 ALX1Q15699 326 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 RCSD1Q6JBY9 416 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 EVI5LQ96CN4 794 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 A1CFQ9NQ94 594 aaKnown RBP20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 IL17RBQ9NRM6 502 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 TBX21Q9UL17 535 aa20.73■□□□□ 0.91
SNRPA1-202ENST00000394082 ASB14A6NK59 587 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 ADCY6O43306 1168 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 ORC4O43929 436 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 TIMP1P01033 207 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 ASGR1P07306 291 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 C6orf222P0C671 652 aaPredicted RBP20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 RNPC3Q96LT9 517 aaKnown RBP20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 HELLSQ9NRZ9 838 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 RNF146Q9NTX7 359 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 STX8Q9UNK0 236 aa20.72■□□□□ 0.91
SNRPA1-202ENST00000394082 MYADML2A6NDP7 307 aa20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 MCCP23508 829 aa20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 EPHB4P54760 987 aa20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 CDX2Q99626 313 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 SEZ6LQ9BYH1 1024 aa20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 ZBTB47Q9UFB7 747 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 MCM3APO60318 1980 aa20.71■□□□□ 0.91
SNRPA1-202ENST00000394082 A0A0U1RQG5 324 aaPredicted RBP20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 ARVCFO00192 962 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 CTAGE5O15320 804 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 CNTN2Q02246 1040 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 IKQ13123 557 aaPredicted RBP20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 MFSD5Q6N075 450 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 AGBL1Q96MI9 1066 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 FAM161BQ96MY7 647 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 TRERF1Q96PN7 1200 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 HOMER2Q9NSB8 354 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 PRUNE2Q8WUY3 3088 aa20.7■□□□□ 0.9
SNRPA1-202ENST00000394082 LOC102724159A0A0B4J2E5 919 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 SOWAHBA6NEL2 793 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 CABYRO75952 493 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 HDAC1Q13547 482 aaPredicted RBP20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 PWP2Q15269 919 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 CCDC174Q6PII3 467 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 DCAF4Q8WV16 495 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 TTYH1Q9H313 450 aaPredicted RBP20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 PRR12Q9ULL5 1215 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 GNEQ9Y223 722 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 Q9Y3F1 56 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 ZMYM6O95789 1325 aa20.69■□□□□ 0.9
SNRPA1-202ENST00000394082 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 PDE1AP54750 535 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 TNFAIP2Q03169 654 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 CTDSPL2Q05D32 466 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 ANKRD45Q5TZF3 282 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 BTNL9Q6UXG8 535 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 KCTD1Q719H9 257 aa20.68■□□□□ 0.9
SNRPA1-202ENST00000394082 FAM126BQ8IXS8 530 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms