RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 TNKSO95271 1327 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 DEXIO95424 95 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 FTCDO95954 541 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 IFNAR1P17181 557 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 TBC1D31Q96DN5 1066 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 GEMIN8Q9NWZ8 242 aaKnown RBP16.23■□□□□ 0.19
SFXN3-202ENST00000393459 SMIM23A6NLE4 172 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
SFXN3-202ENST00000393459 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 CTCFLQ8NI51 663 aaPredicted RBP16.23■□□□□ 0.19
SFXN3-202ENST00000393459 ZIM3Q96PE6 472 aa16.23■□□□□ 0.19
SFXN3-202ENST00000393459 PARP4Q9UKK3 1724 aaKnown RBP16.23■□□□□ 0.19
SFXN3-202ENST00000393459 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 KRT2P35908 639 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 CCDC70Q6NSX1 233 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 KANK3Q6NY19 840 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 GIMAP7Q8NHV1 300 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 EPB41L5Q9HCM4 733 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 CEP131Q9UPN4 1083 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 NHSL1Q5SYE7 1610 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 HSF2BPO75031 334 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 PDHBP11177 359 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 RASSF7Q02833 373 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 CSGALNACT2Q8N6G5 542 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 TMEM87BQ96K49 555 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 RBM12Q9NTZ6 932 aaKnown RBP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 MYH13Q9UKX3 1938 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 EIF3HO15372 352 aaKnown RBP eCLIP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 TMOD1P28289 359 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 SPA17Q15506 151 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
SFXN3-202ENST00000393459 SUFUQ9UMX1 484 aa16.22■□□□□ 0.19
SFXN3-202ENST00000393459 EPHB6O15197 1021 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 IL2RBP14784 551 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 EVA1CP58658 441 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 WDR93Q6P2C0 686 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
SFXN3-202ENST00000393459 MB21D1Q8N884 522 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 HAUS4Q9H6D7 363 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.19
SFXN3-202ENST00000393459 FCER1AP12319 257 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 PPFIA1Q13136 1202 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 IRF2BP1Q8IU81 584 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 WASF1Q92558 559 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 IFIH1Q9BYX4 1025 aaKnown RBP16.21■□□□□ 0.19
SFXN3-202ENST00000393459 TRIM31Q9BZY9 425 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 GGT7Q9UJ14 662 aa16.21■□□□□ 0.19
SFXN3-202ENST00000393459 SF3B2Q13435 895 aaKnown RBP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 IL17AQ16552 155 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 NT5DC1Q5TFE4 455 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 SPATA4Q8NEY3 305 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 ABCA3Q99758 1704 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 MYH15Q9Y2K3 1946 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 ZNF263O14978 683 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 RASGRF1Q13972 1273 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 TICAM2Q86XR7 235 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 TRIML1Q8N9V2 468 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 N4BP2L2Q92802 583 aaPredicted RBP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 TUBGCP2Q9BSJ2 902 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 GRIN2DO15399 1336 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 GSG1L2A8MUP6 293 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 OPLAHO14841 1288 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 GFPT1Q06210 699 aaPredicted RBP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 SPRED3Q2MJR0 410 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 CEP85LQ5SZL2 805 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 KRT12Q99456 494 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 NOC4LQ9BVI4 516 aaKnown RBP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
SFXN3-202ENST00000393459 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 SALL4Q9UJQ4 1053 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
SFXN3-202ENST00000393459 GLI1P08151 1106 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 CFAP58Q5T655 872 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 IFIT1BQ5T764 474 aaKnown RBP16.19■□□□□ 0.18
SFXN3-202ENST00000393459 RRAGAQ7L523 313 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 DYMQ7RTS9 669 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 ADAT2Q7Z6V5 191 aaKnown RBP16.19■□□□□ 0.18
SFXN3-202ENST00000393459 UHMK1Q8TAS1 419 aaKnown RBP16.19■□□□□ 0.18
SFXN3-202ENST00000393459 GSDMAQ96QA5 445 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 PPP2R5AQ15172 486 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
SFXN3-202ENST00000393459 PCNTO95613 3336 aa16.18■□□□□ 0.18
SFXN3-202ENST00000393459 CYP7A1P22680 504 aa16.18■□□□□ 0.18
SFXN3-202ENST00000393459 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
SFXN3-202ENST00000393459 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
SFXN3-202ENST00000393459 RPS6KA5O75582 802 aa16.18■□□□□ 0.18
SFXN3-202ENST00000393459 UPP2O95045 317 aa16.18■□□□□ 0.18
SFXN3-202ENST00000393459 MYBL1P10243 752 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms