RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 TINF2Q9BSI4 451 aa22.5■■□□□ 1.19
CRAT-202ENST00000393384 DIAPH3Q9NSV4 1193 aa22.5■■□□□ 1.19
CRAT-202ENST00000393384 TCP11L1Q9NUJ3 509 aa22.5■■□□□ 1.19
CRAT-202ENST00000393384 MCM3APO60318 1980 aa22.5■■□□□ 1.19
CRAT-202ENST00000393384 SLC4A3P48751 1232 aa22.49■■□□□ 1.19
CRAT-202ENST00000393384 RRP12Q5JTH9 1297 aaKnown RBP22.49■■□□□ 1.19
CRAT-202ENST00000393384 CWC27Q6UX04 472 aaKnown RBP22.49■■□□□ 1.19
CRAT-202ENST00000393384 CHST13Q8NET6 341 aa22.49■■□□□ 1.19
CRAT-202ENST00000393384 DDX11Q96FC9 970 aa22.49■■□□□ 1.19
CRAT-202ENST00000393384 FAM161BQ96MY7 647 aa22.49■■□□□ 1.19
CRAT-202ENST00000393384 FBXO40Q9UH90 709 aa22.49■■□□□ 1.19
CRAT-202ENST00000393384 ISY1Q9ULR0 285 aaKnown RBP22.49■■□□□ 1.19
CRAT-202ENST00000393384 DNAJC25-GNG10A0A024R161 153 aa22.48■■□□□ 1.19
CRAT-202ENST00000393384 HAND2P61296 217 aa22.48■■□□□ 1.19
CRAT-202ENST00000393384 SNX17Q15036 470 aa22.48■■□□□ 1.19
CRAT-202ENST00000393384 AKNAD1Q5T1N1 836 aa22.48■■□□□ 1.19
CRAT-202ENST00000393384 MFSD6Q6ZSS7 791 aa22.48■■□□□ 1.19
CRAT-202ENST00000393384 MSL3Q8N5Y2 521 aaKnown RBP22.48■■□□□ 1.19
CRAT-202ENST00000393384 COL25A1Q9BXS0 654 aaPredicted RBP22.48■■□□□ 1.19
CRAT-202ENST00000393384 PRDM5Q9NQX1 630 aaPredicted RBP22.48■■□□□ 1.19
CRAT-202ENST00000393384 IKQ13123 557 aaPredicted RBP22.47■■□□□ 1.19
CRAT-202ENST00000393384 ANO1Q5XXA6 986 aa22.47■■□□□ 1.19
CRAT-202ENST00000393384 KCTD1Q719H9 257 aa22.47■■□□□ 1.19
CRAT-202ENST00000393384 RNF41Q9H4P4 317 aaPredicted RBP22.47■■□□□ 1.19
CRAT-202ENST00000393384 ZNF213O14771 459 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 MYCNP04198 464 aaPredicted RBP22.46■■□□□ 1.19
CRAT-202ENST00000393384 TOP1P11387 765 aaKnown RBP22.46■■□□□ 1.19
CRAT-202ENST00000393384 IRX6P78412 446 aaPredicted RBP22.46■■□□□ 1.19
CRAT-202ENST00000393384 LRRC41Q15345 812 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 SHHQ15465 462 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 TRIM60Q495X7 471 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 C1orf53Q5VUE5 145 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 DCAF4Q8WV16 495 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 CHMP4CQ96CF2 233 aa22.46■■□□□ 1.19
CRAT-202ENST00000393384 PDE4AP27815 886 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 MAMDC4Q6UXC1 1216 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 ZNF467Q7Z7K2 595 aaPredicted RBP22.45■■□□□ 1.18
CRAT-202ENST00000393384 TBC1D10CQ8IV04 446 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 ANKRD35Q8N283 1001 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 TTC14Q96N46 770 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 TMEM47Q9BQJ4 181 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 PDLIM7Q9NR12 457 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 ZNF536O15090 1300 aa22.45■■□□□ 1.18
CRAT-202ENST00000393384 ZNF865P0CJ78 1059 aaPredicted RBP22.44■■□□□ 1.18
CRAT-202ENST00000393384 ADCYAP1R1P41586 468 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 NT5C2P49902 561 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 TKFCQ3LXA3 575 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 C9orf50Q5SZB4 431 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 BADQ92934 168 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 SYNGAP1Q96PV0 1343 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 DSCC1Q9BVC3 393 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 PRR12Q9ULL5 1215 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 CNPY2Q9Y2B0 182 aa22.44■■□□□ 1.18
CRAT-202ENST00000393384 TAL1P17542 331 aaPredicted RBP22.43■■□□□ 1.18
CRAT-202ENST00000393384 SMAD3P84022 425 aaKnown RBP22.43■■□□□ 1.18
CRAT-202ENST00000393384 TTC22Q5TAA0 569 aa22.43■■□□□ 1.18
CRAT-202ENST00000393384 RASGRP2Q7LDG7 609 aa22.43■■□□□ 1.18
CRAT-202ENST00000393384 AGBL1Q96MI9 1066 aa22.43■■□□□ 1.18
CRAT-202ENST00000393384 CDX2Q99626 313 aaPredicted RBP22.43■■□□□ 1.18
CRAT-202ENST00000393384 ACAD9Q9H845 621 aa22.43■■□□□ 1.18
CRAT-202ENST00000393384 SNAI1O95863 264 aaPredicted RBP22.42■■□□□ 1.18
CRAT-202ENST00000393384 RARBP10826 455 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 AKR1A1P14550 325 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 CCDC96Q2M329 555 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 BTNL9Q6UXG8 535 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 ESR2Q92731 530 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 FERMT2Q96AC1 680 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 SEMA6BQ9H3T3 888 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 HOMER2Q9NSB8 354 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 PHF24Q9UPV7 400 aa22.42■■□□□ 1.18
CRAT-202ENST00000393384 NEDD4P46934 1319 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 GSPT1P15170 499 aaKnown RBP22.41■■□□□ 1.18
CRAT-202ENST00000393384 CCDC174Q6PII3 467 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 TRERF1Q96PN7 1200 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 XPNPEP3Q9NQH7 507 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 RNF146Q9NTX7 359 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 CTNNA3Q9UI47 895 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 LCTP09848 1927 aa22.41■■□□□ 1.18
CRAT-202ENST00000393384 TRIM43BA6NCK2 446 aa22.4■■□□□ 1.18
CRAT-202ENST00000393384 TTBK2Q6IQ55 1244 aa22.4■■□□□ 1.18
CRAT-202ENST00000393384 SH3RF1Q7Z6J0 888 aa22.4■■□□□ 1.18
CRAT-202ENST00000393384 RNF180Q86T96 592 aa22.4■■□□□ 1.18
CRAT-202ENST00000393384 TRIM43Q96BQ3 446 aaPredicted RBP22.4■■□□□ 1.18
CRAT-202ENST00000393384 FGD4Q96M96 766 aa22.4■■□□□ 1.18
CRAT-202ENST00000393384 RANBP17Q9H2T7 1088 aaKnown RBP22.4■■□□□ 1.18
CRAT-202ENST00000393384 PDHBP11177 359 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 ALAS1P13196 640 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 SNAP25P60880 206 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 TLE2Q04725 743 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 IMMTQ16891 758 aaKnown RBP22.39■■□□□ 1.17
CRAT-202ENST00000393384 CCDC178Q5BJE1 867 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 DGKHQ86XP1 1220 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 MAFAQ8NHW3 353 aaPredicted RBP22.39■■□□□ 1.17
CRAT-202ENST00000393384 A1CFQ9NQ94 594 aaKnown RBP22.39■■□□□ 1.17
CRAT-202ENST00000393384 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.39■■□□□ 1.17
CRAT-202ENST00000393384 FAM184BQ9ULE4 1060 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 VCANP13611 3396 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 MYH6P13533 1939 aa22.39■■□□□ 1.17
CRAT-202ENST00000393384 FRMPD2Q68DX3 1309 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms