RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 IRX3P78415 501 aaPredicted RBP15.39■□□□□ 0.05
USP44-202ENST00000393091 FGD1P98174 961 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 SPICE1Q8N0Z3 855 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 CHST13Q8NET6 341 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 FRMPD4Q14CM0 1322 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 FLOT1O75955 427 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 TMEM132BQ14DG7 1078 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 MICU3Q86XE3 530 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 DAGLBQ8NCG7 672 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 FRMPD2Q68DX3 1309 aaPredicted RBP15.38■□□□□ 0.05
USP44-202ENST00000393091 PIK3CDO00329 1044 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 HMGN5P82970 282 aaKnown RBP15.38■□□□□ 0.05
USP44-202ENST00000393091 CCDC96Q2M329 555 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 ATG4CQ96DT6 458 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
USP44-202ENST00000393091 MYL10Q9BUA6 226 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 MROH8Q9H579 483 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 BTBD7Q9P203 1132 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 ZSWIM8A7E2V4 1837 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 DEXIO95424 95 aa15.38■□□□□ 0.05
USP44-202ENST00000393091 SMCHD1A6NHR9 2005 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 PPP1R11O60927 126 aaPredicted RBP15.37■□□□□ 0.05
USP44-202ENST00000393091 ADD1P35611 737 aaKnown RBP15.37■□□□□ 0.05
USP44-202ENST00000393091 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 ERVK-24P63145 666 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 ZYXQ15942 572 aaKnown RBP15.37■□□□□ 0.05
USP44-202ENST00000393091 MCTP2Q6DN12 878 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 GALNT17Q6IS24 598 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 CPLX2Q6PUV4 134 aaKnown RBP15.37■□□□□ 0.05
USP44-202ENST00000393091 TEX13BQ9BXU2 312 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 GLT8D2Q9H1C3 349 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 GPCPD1Q9NPB8 672 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 FBXO28Q9NVF7 368 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 CRHR2Q13324 411 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
USP44-202ENST00000393091 WASF1Q92558 559 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 BARHL2Q9NY43 387 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
USP44-202ENST00000393091 FDPSP14324 419 aaKnown RBP15.36■□□□□ 0.05
USP44-202ENST00000393091 IRF5Q13568 498 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 GPRC5AQ8NFJ5 357 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 USP6NLQ92738 828 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 SPATC1LQ9H0A9 340 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 TAF1CQ15572 869 aaPredicted RBP15.36■□□□□ 0.05
USP44-202ENST00000393091 QRICH1Q2TAL8 776 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 NUP133Q8WUM0 1156 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 TXNRD2Q9NNW7 524 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 GOLGA8HP0CJ92 632 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 MAPK4P31152 587 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 HSD17B4P51659 736 aa15.36■□□□□ 0.05
USP44-202ENST00000393091 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.36■□□□□ 0.05
USP44-202ENST00000393091 KIAA1217Q5T5P2 1943 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 STXBP3O00186 592 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
USP44-202ENST00000393091 DNAJC25-GNG10A0A024R161 153 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 M0R2N6 131 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 STRNO43815 780 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 SCG2P13521 617 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
USP44-202ENST00000393091 CCNA1P78396 465 aa15.35■□□□□ 0.05
USP44-202ENST00000393091 MORC4Q8TE76 937 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 PIGSQ96S52 555 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 DIS3Q9Y2L1 958 aaKnown RBP15.34■□□□□ 0.05
USP44-202ENST00000393091 OPLAHO14841 1288 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 CYP2C8P10632 490 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 HTRA3P83110 453 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 MORN1Q5T089 497 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 ZNF467Q7Z7K2 595 aaPredicted RBP15.34■□□□□ 0.05
USP44-202ENST00000393091 FBXO11Q86XK2 927 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 KIFC2Q96AC6 838 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 NCOA5Q9HCD5 579 aaKnown RBP15.34■□□□□ 0.05
USP44-202ENST00000393091 PFASO15067 1338 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 DDIT3P35638 169 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 SLC16A2P36021 539 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 PRMT2P55345 433 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 TRIM22Q8IYM9 498 aa15.34■□□□□ 0.05
USP44-202ENST00000393091 MOV10L1Q9BXT6 1211 aaKnown RBP15.34■□□□□ 0.05
USP44-202ENST00000393091 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
USP44-202ENST00000393091 FRMPD3Q5JV73 1810 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 HOXC6P09630 235 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 STAT3P40763 770 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 MKRN3Q13064 507 aaKnown RBP15.33■□□□□ 0.04
USP44-202ENST00000393091 HSCBQ8IWL3 235 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 RXRAP19793 462 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 GRB14Q14449 540 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 CCDC12Q8WUD4 166 aaPredicted RBP15.33■□□□□ 0.04
USP44-202ENST00000393091 SHISA4Q96DD7 197 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 PHF20Q9BVI0 1012 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
USP44-202ENST00000393091 PTPDC1A2A3K4 754 aa15.32■□□□□ 0.04
USP44-202ENST00000393091 SLC15A5A6NIM6 579 aa15.32■□□□□ 0.04
USP44-202ENST00000393091 CCT2P78371 535 aaKnown RBP15.32■□□□□ 0.04
USP44-202ENST00000393091 Q3C1V9 767 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms