RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 Q6ZUG5 572 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 OTOP1Q7RTM1 612 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 PLEKHH3Q7Z736 793 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 RIOX2Q8IUF8 465 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 ZNF654Q8IZM8 581 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 ABRAQ8N0Z2 381 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 FANCBQ8NB91 859 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 REPS2Q8NFH8 660 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 CTCFLQ8NI51 663 aaPredicted RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 CD99L2Q8TCZ2 262 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 MOV10L1Q9BXT6 1211 aaKnown RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TEX13BQ9BXU2 312 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 MAF1Q9H063 256 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 ALDH8A1Q9H2A2 487 aaPredicted RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 RANBP17Q9H2T7 1088 aaKnown RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 FBXO40Q9UH90 709 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 MAD2L2Q9UI95 211 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 ZNF214Q9UL59 606 aaPredicted RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TRIM17Q9Y577 477 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 IVNS1ABPQ9Y6Y0 642 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 FRMPD2Q68DX3 1309 aaPredicted RBP7.87□□□□□ -1.15
UBBP1-201ENST00000392399 CCDC196A0A1B0GTZ2 297 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 ZBTB43O43298 467 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 ICAM1P05362 532 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 GOLGA8HP0CJ92 632 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 SLC16A2P36021 539 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 IRF5Q13568 498 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
UBBP1-201ENST00000392399 PLS1Q14651 629 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 TTBK2Q6IQ55 1244 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 APOA5Q6Q788 366 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBBP1-201ENST00000392399 GPR142Q7Z601 462 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 ADGRF4Q8IZF3 695 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 CHST13Q8NET6 341 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 NUP133Q8WUM0 1156 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 SOCS4Q8WXH5 440 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 TRIM47Q96LD4 638 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 NUDT12Q9BQG2 462 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 LRRC2Q9BYS8 371 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 BACH2Q9BYV9 841 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 C22orf23Q9BZE7 217 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 UBA5Q9GZZ9 404 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 RIOX1Q9H6W3 641 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 SENP2Q9HC62 589 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 CWC22Q9HCG8 908 aaKnown RBP7.87□□□□□ -1.15
UBBP1-201ENST00000392399 GPHNQ9NQX3 736 aaPredicted RBP7.87□□□□□ -1.15
UBBP1-201ENST00000392399 RBM28Q9NW13 759 aaKnown RBP7.87□□□□□ -1.15
UBBP1-201ENST00000392399 SLC5A4Q9NY91 659 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 SRRDQ9UH36 339 aa7.87□□□□□ -1.15
UBBP1-201ENST00000392399 CASP8AP2Q9UKL3 1982 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 RLFQ13129 1914 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 ZNF536O15090 1300 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 KLF18A0A0U1RQI7 1052 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 SLC15A5A6NIM6 579 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 FCER1AP12319 257 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 XRCC5P13010 732 aaKnown RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 CPA1P15085 419 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 ERCC3P19447 782 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 PTPREP23469 700 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 SNRNP48Q6IEG0 339 aaKnown RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 FBXO46Q6PJ61 603 aaPredicted RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 NCAPG2Q86XI2 1143 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 CPXCR1Q8N123 301 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 STAG2Q8N3U4 1231 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 PXYLP1Q8TE99 480 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 BRF1Q92994 677 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 CHMP4CQ96CF2 233 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 MTMR8Q96EF0 704 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 ZNF274Q96GC6 653 aaPredicted RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 TCEANC2Q96MN5 208 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 SPZ1Q9BXG8 430 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 ARHGAP39Q9C0H5 1083 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 PORCNQ9H237 461 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 JMJD4Q9H9V9 463 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 RAVER2Q9HCJ3 691 aaKnown RBP7.86□□□□□ -1.15
UBBP1-201ENST00000392399 PDRG1Q9NUG6 133 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 GJD2Q9UKL4 321 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 PTPN22Q9Y2R2 807 aa7.86□□□□□ -1.15
UBBP1-201ENST00000392399 PNMA6FA0A0J9YX94 578 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 ZBTB5O15062 677 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 DHX16O60231 1041 aaKnown RBP7.85□□□□□ -1.15
UBBP1-201ENST00000392399 PEX10O60683 326 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 HOXC6P09630 235 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 CTGFP29279 349 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 FLT3LGP49771 235 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 METAP2P50579 478 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBBP1-201ENST00000392399 NEK4P51957 841 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 APOBRQ0VD83 1088 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 TOB2Q14106 344 aaPredicted RBP7.85□□□□□ -1.15
UBBP1-201ENST00000392399 GRB14Q14449 540 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 KCTD2Q14681 263 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 RTN1Q16799 776 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 MORN1Q5T089 497 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 WDR78Q5VTH9 848 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 RASGRP2Q7LDG7 609 aa7.85□□□□□ -1.15
UBBP1-201ENST00000392399 NBPF11Q86T75 865 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms