RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 COA7Q96BR5 231 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 TEPSINQ96N21 525 aa13.05□□□□□ -0.32
SMARCAL1-203ENST00000392128 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 C4orf32Q8N8J7 132 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 RIC8AQ9NPQ8 531 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 ANO10Q9NW15 660 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 BMP3P12645 472 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 LMNB1P20700 586 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 LONRF3Q496Y0 759 aa13.04□□□□□ -0.32
SMARCAL1-203ENST00000392128 LAD1O00515 517 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 QRICH1Q2TAL8 776 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 CNNM3Q8NE01 707 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 DNAJC25Q9H1X3 360 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 ASNSP08243 561 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 ECE1P42892 770 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 ZNF165P49910 485 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 ARHGAP27Q6ZUM4 889 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 TUBE1Q9UJT0 475 aa13.03□□□□□ -0.32
SMARCAL1-203ENST00000392128 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 H7C1D1 291 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 USP49Q70CQ1 688 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 GPC2Q8N158 579 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 ACER1Q8TDN7 264 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 SYMPKQ92797 1274 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 CUL5Q93034 780 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 GINM1Q9NU53 330 aa13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 BIN2Q9UBW5 565 aaPredicted RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-203ENST00000392128 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 PRPHP41219 470 aa13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 IL17AQ16552 155 aa13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 KANK3Q6NY19 840 aa13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 EPSTI1Q96J88 318 aa13.02□□□□□ -0.33
SMARCAL1-203ENST00000392128 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 VCPKMTQ9H867 229 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 GPRC5DQ9NZD1 345 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 ASTN2O75129 1339 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 CEP57L1Q8IYX8 460 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 PSTPIP2Q9H939 334 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 PCDHA1Q9Y5I3 950 aa13.01□□□□□ -0.33
SMARCAL1-203ENST00000392128 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 DOCK1Q14185 1865 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
SMARCAL1-203ENST00000392128 PLA2G6O60733 806 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 STAT2P52630 851 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 NLRP12P59046 1061 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 PNOCQ13519 176 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 IQCB1Q15051 598 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 LETM2Q2VYF4 491 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 KIAA1755Q5JYT7 1200 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 DTHD1Q6ZMT9 781 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 APOBEC3FQ8IUX4 373 aaKnown RBP13□□□□□ -0.33
SMARCAL1-203ENST00000392128 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 CCDC34Q96HJ3 373 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 TMEM60Q9H2L4 133 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
SMARCAL1-203ENST00000392128 A0A087X0B3 334 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
SMARCAL1-203ENST00000392128 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
SMARCAL1-203ENST00000392128 POSTNQ15063 836 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 PDILTQ8N807 584 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 BPIFA3Q9BQP9 254 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
SMARCAL1-203ENST00000392128 NEMFO60524 1076 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms