RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 HPDP32754 393 aaPredicted RBP16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 TMTC2Q8N394 836 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 LRRC1Q9BTT6 524 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 NOC4LQ9BVI4 516 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 EBAG9O00559 213 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 SEC23AQ15436 765 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 COG1Q8WTW3 980 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 SLC39A2Q9NP94 309 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 SAP30BPQ9UHR5 308 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 USP14P54578 494 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 PDE4DQ08499 809 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 LETM2Q2VYF4 491 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 ANKRD18AQ8IVF6 992 aa16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 NOC3LQ8WTT2 800 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-204ENST00000392000 PSMA7O14818 248 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 KCNQ2O43526 872 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 TUBGCP2Q9BSJ2 902 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 RNF26Q9BY78 433 aaPredicted RBP16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 MYH8P13535 1937 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 SYF2O95926 243 aaKnown RBP16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 DNAAF5Q86Y56 855 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 MS4A14Q96JA4 679 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 PHF20Q9BVI0 1012 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 RAB21Q9UL25 225 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 PACSIN2Q9UNF0 486 aaPredicted RBP16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 KCPQ6ZWJ8 1503 aa16.25■□□□□ 0.19
LRRFIP1-204ENST00000392000 ZSCAN5CA6NGD5 496 aaPredicted RBP16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 FCER1AP12319 257 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 CYLC1P35663 651 aaPredicted RBP16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 HERVK_113P62684 666 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 SPAG1Q07617 926 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 TROAPQ12815 778 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 MB21D1Q8N884 522 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 TBC1D7Q9P0N9 293 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 NDUFAB1O14561 156 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 GNAT2P19087 354 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 MYH15Q9Y2K3 1946 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 KRT14P02533 472 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 HLTFQ14527 1009 aaKnown RBP eCLIP16.24■□□□□ 0.192e-7■□□□□ 9.9
LRRFIP1-204ENST00000392000 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 HAUS4Q9H6D7 363 aa16.24■□□□□ 0.19
LRRFIP1-204ENST00000392000 FAM205AQ6ZU69 1335 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 SHTN1A0MZ66 631 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 LRRC41Q15345 812 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 FAM182BQ5T319 152 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 ZNF384Q8TF68 577 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 TMEM60Q9H2L4 133 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 MAGEA9P43362 315 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 TFAP4Q01664 338 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 RRAGAQ7L523 313 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 MAATS1Q7Z4T9 603 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 IFIH1Q9BYX4 1025 aaKnown RBP16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 MARCH6O60337 910 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 ERLIN2O94905 339 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 ITPK1Q13572 414 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 ICE2Q659A1 982 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
LRRFIP1-204ENST00000392000 GTPBP6O43824 516 aaPredicted RBP16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 PPFIA4O75335 1185 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 KRT83P78385 493 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 MECOMQ03112 1051 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 ARL8AQ96BM9 186 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 MED4Q9NPJ6 270 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 SCG2P13521 617 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 RASSF7Q02833 373 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 DIXDC1Q155Q3 683 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 ZNF658Q5TYW1 1059 aaPredicted RBP16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 TMTC3Q6ZXV5 915 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 KLHL7Q8IXQ5 586 aa16.22■□□□□ 0.19
LRRFIP1-204ENST00000392000 ZNF512BQ96KM6 892 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms