RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 ELP1O95163 1332 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 ZNFX1Q9P2E3 1918 aaKnown RBP10.69□□□□□ -0.7
TRAV20-201ENST00000390448 DNAJC25-GNG10A0A024R161 153 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.69□□□□□ -0.7
TRAV20-201ENST00000390448 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.69□□□□□ -0.7
TRAV20-201ENST00000390448 TLR3O15455 904 aaKnown RBP10.69□□□□□ -0.7
TRAV20-201ENST00000390448 TIMP1P01033 207 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 ASGR1P07306 291 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 ITGB8P26012 769 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 SLC1A4P43007 532 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 STAT2P52630 851 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 OAZ1P54368 228 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 FAAP100Q0VG06 881 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 ARMCX2Q7L311 632 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 TMEM199Q8N511 208 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 NEDD1Q8NHV4 660 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 COL25A1Q9BXS0 654 aaPredicted RBP10.69□□□□□ -0.7
TRAV20-201ENST00000390448 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 EPB41L4AQ9HCS5 686 aaPredicted RBP10.69□□□□□ -0.7
TRAV20-201ENST00000390448 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 PRUNE2Q8WUY3 3088 aa10.69□□□□□ -0.7
TRAV20-201ENST00000390448 TTC41PQ6P2S7 1318 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 IGKV6D-41A0A0C4DH26 115 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 A0A0U1RQG5 324 aaPredicted RBP10.68□□□□□ -0.7
TRAV20-201ENST00000390448 ASB14A6NK59 587 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 TSPY2A6NKD2 308 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 MCCP23508 829 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 EPHB4P54760 987 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 PPARAQ07869 468 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 PPIGQ13427 754 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRAV20-201ENST00000390448 FAM160B2Q86V87 743 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 KLHDC9Q8NEP7 349 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 VCANP13611 3396 aa10.68□□□□□ -0.7
TRAV20-201ENST00000390448 COL11A1P12107 1806 aaPredicted RBP10.68□□□□□ -0.7
TRAV20-201ENST00000390448 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 MYADML2A6NDP7 307 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 ARVCFO00192 962 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 ZEB2O60315 1214 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 RANBP6O60518 1105 aaKnown RBP10.67□□□□□ -0.7
TRAV20-201ENST00000390448 ALAS1P13196 640 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 GJA9P57773 515 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 CNTN2Q02246 1040 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 MFSD5Q6N075 450 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 SEC62Q99442 399 aaKnown RBP10.67□□□□□ -0.7
TRAV20-201ENST00000390448 PPP1R12CQ9BZL4 782 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 TTYH1Q9H313 450 aaPredicted RBP10.67□□□□□ -0.7
TRAV20-201ENST00000390448 TOMM22Q9NS69 142 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 RNF146Q9NTX7 359 aa10.67□□□□□ -0.7
TRAV20-201ENST00000390448 MYH7P12883 1935 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 CDH23Q9H251 3354 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 DNAJB2P25686 324 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 CST5P28325 142 aaPredicted RBP10.66□□□□□ -0.7
TRAV20-201ENST00000390448 BEX3Q00994 111 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 CCDC96Q2M329 555 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 CCSAPQ6IQ19 270 aaPredicted RBP10.66□□□□□ -0.7
TRAV20-201ENST00000390448 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 KCTD1Q719H9 257 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRAV20-201ENST00000390448 MTIF3Q9H2K0 278 aaKnown RBP10.66□□□□□ -0.7
TRAV20-201ENST00000390448 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
TRAV20-201ENST00000390448 LTBP2Q14767 1821 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 DYNC1LI2O43237 492 aaPredicted RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 CABYRO75952 493 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 ACRP10323 421 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 CSF2RAP15509 400 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 MX1P20591 662 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 CDK7P50613 346 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 SNAP25P60880 206 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 FSCN1Q16658 493 aaKnown RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 NSMFQ6X4W1 530 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 EEPD1Q7L9B9 569 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 GAS2L1Q99501 681 aaPredicted RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 UPF3AQ9H1J1 476 aaKnown RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 A1CFQ9NQ94 594 aaKnown RBP10.65□□□□□ -0.7
TRAV20-201ENST00000390448 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 TBX21Q9UL17 535 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.7
TRAV20-201ENST00000390448 PARP14Q460N5 1801 aa10.65□□□□□ -0.71
TRAV20-201ENST00000390448 ADCY6O43306 1168 aa10.64□□□□□ -0.71
TRAV20-201ENST00000390448 NMT2O60551 498 aa10.64□□□□□ -0.71
TRAV20-201ENST00000390448 ITGA7Q13683 1181 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms