RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 ABCB11O95342 1321 aa12.78□□□□□ -0.36
CCDC149-202ENST00000389609 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.36
CCDC149-202ENST00000389609 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 A0A1W2PQJ5 194 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 SMIM22K7EJ46 135 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 PSMA7O14818 248 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 CYLC1P35663 651 aaPredicted RBP12.77□□□□□ -0.36
CCDC149-202ENST00000389609 ZNF174Q15697 407 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 ADGRA1Q86SQ6 560 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.36
CCDC149-202ENST00000389609 MB21D1Q8N884 522 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 CPLX3Q8WVH0 158 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 LZTS2Q9BRK4 669 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.36
CCDC149-202ENST00000389609 TSGA10Q9BZW7 698 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 DEF6Q9H4E7 631 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.36
CCDC149-202ENST00000389609 THRAP3Q9Y2W1 955 aaKnown RBP12.77□□□□□ -0.36
CCDC149-202ENST00000389609 LUC7L2Q9Y383 392 aaKnown RBP12.77□□□□□ -0.36
CCDC149-202ENST00000389609 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 MYH13Q9UKX3 1938 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 PRDM1O75626 825 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
CCDC149-202ENST00000389609 CASP1P29466 404 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 HSP90B2PQ58FF3 399 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 BLIDQ8IZY5 108 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 ABCF2Q9UG63 623 aa12.77□□□□□ -0.37
CCDC149-202ENST00000389609 MKRN1Q9UHC7 482 aaKnown RBP12.77□□□□□ -0.37
CCDC149-202ENST00000389609 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 M0R2N6 131 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 KRT86O43790 486 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 CLSTN1O94985 981 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 SRGNP10124 158 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 BRD2P25440 801 aaKnown RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 STAT6P42226 847 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 GSCP56915 257 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 SIK1P57059 783 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 GIMAP8Q8ND71 665 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 MTRQ99707 1265 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 hCG_1642624A0A1W2PR95 340 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 USP14P54578 494 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 UBXN1Q04323 297 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 CASP8Q14790 479 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 SLC10A5Q5PT55 438 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 ZNF572Q7Z3I7 529 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 PNKPQ96T60 521 aa12.76□□□□□ -0.37
CCDC149-202ENST00000389609 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
CCDC149-202ENST00000389609 IPO7O95373 1038 aaKnown RBP12.75□□□□□ -0.37
CCDC149-202ENST00000389609 CCDC172P0C7W6 258 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 CCT6AP40227 531 aaKnown RBP12.75□□□□□ -0.37
CCDC149-202ENST00000389609 PRCPP42785 496 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 DTHD1Q6ZMT9 781 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 CCDC91Q7Z6B0 441 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 IRF2BP1Q8IU81 584 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 ACRBPQ8NEB7 543 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 NSUN4Q96CB9 384 aaKnown RBP12.75□□□□□ -0.37
CCDC149-202ENST00000389609 TTYH3Q9C0H2 523 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 ABCB6Q9NP58 842 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 VPS18Q9P253 973 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 PUF60Q9UHX1 559 aaKnown RBP12.75□□□□□ -0.37
CCDC149-202ENST00000389609 NIP7Q9Y221 180 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC149-202ENST00000389609 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
CCDC149-202ENST00000389609 WNT7AO00755 349 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 PRLRP16471 622 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 HNRNPH3P31942 346 aaKnown RBP12.74□□□□□ -0.37
CCDC149-202ENST00000389609 ZBED6P86452 979 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-202ENST00000389609 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-202ENST00000389609 ERGIC2Q96RQ1 377 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 VPS16Q9H269 839 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
CCDC149-202ENST00000389609 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 SAR1BQ9Y6B6 198 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 USP17L12C9JPN9 530 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 USP17L21D6R901 530 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 VSNL1P62760 191 aa12.74□□□□□ -0.37
CCDC149-202ENST00000389609 GRM4Q14833 912 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms