RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TRPV6Q9H1D0 765 aa11.63□□□□□ -0.55
IFT88-203ENST00000389373 ABHD16BQ9H3Z7 469 aa11.63□□□□□ -0.55
IFT88-203ENST00000389373 DNAJC25-GNG10A0A024R161 153 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
IFT88-203ENST00000389373 ZBED4O75132 1171 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 CA3P07451 260 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 TNFAIP2Q03169 654 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
IFT88-203ENST00000389373 ARMCX2Q7L311 632 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 TMEM57Q8N5G2 664 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 ARNTL2Q8WYA1 636 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 HLA-CQ95604 372 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 RAVER2Q9HCJ3 691 aaKnown RBP11.62□□□□□ -0.55
IFT88-203ENST00000389373 COG5Q9UP83 839 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
IFT88-203ENST00000389373 EPOPA6NHQ4 379 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 GOLIM4O00461 696 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 CTAGE5O15320 804 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 DYNC1LI2O43237 492 aaPredicted RBP11.61□□□□□ -0.55
IFT88-203ENST00000389373 ZEB2O60315 1214 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 B4GALT4O60513 344 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 GPR37L1O60883 481 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 PSMC6P62333 389 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 TTLL4Q14679 1199 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
IFT88-203ENST00000389373 CCDC144CPQ8IYA2 1237 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 UIMC1Q96RL1 719 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 NOC4LQ9BVI4 516 aaKnown RBP11.61□□□□□ -0.55
IFT88-203ENST00000389373 AP5M1Q9H0R1 490 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 WNT8AQ9H1J5 351 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
IFT88-203ENST00000389373 NAV1Q8NEY1 1877 aa11.61□□□□□ -0.55
IFT88-203ENST00000389373 COL11A1P12107 1806 aaPredicted RBP11.6□□□□□ -0.55
IFT88-203ENST00000389373 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
IFT88-203ENST00000389373 USP17L12C9JPN9 530 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 USP17L21D6R901 530 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 CABYRO75952 493 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 MBD4O95243 580 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 PTGS1P23219 599 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 C12orf60Q5U649 245 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 TLK2Q86UE8 772 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 PRPF38AQ8NAV1 312 aaKnown RBP11.6□□□□□ -0.55
IFT88-203ENST00000389373 SLC43A3Q8NBI5 491 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 DDRGK1Q96HY6 314 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 IL1RAPL2Q9NP60 686 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 C11orf16Q9NQ32 467 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 HOMER2Q9NSB8 354 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 ASTN1O14525 1302 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
IFT88-203ENST00000389373 GBF1Q92538 1859 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 TCRBV5S4A2TA0A5A2 114 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 F5H6K3 240 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 CYP2C9P11712 490 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 CNTN2Q02246 1040 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 KLRC3Q07444 240 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
IFT88-203ENST00000389373 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 FGD4Q96M96 766 aa11.59□□□□□ -0.55
IFT88-203ENST00000389373 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
IFT88-203ENST00000389373 ISY1Q9ULR0 285 aaKnown RBP11.59□□□□□ -0.55
IFT88-203ENST00000389373 KIF28PB7ZC32 967 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 PI4K2BG5E9Z4 385 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 ACTN1P12814 892 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 POU3F3P20264 500 aaPredicted RBP11.58□□□□□ -0.56
IFT88-203ENST00000389373 EEPD1Q7L9B9 569 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 AGBL1Q96MI9 1066 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 CD320Q9NPF0 282 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 CLIP2Q9UDT6 1046 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 FBXO40Q9UH90 709 aa11.58□□□□□ -0.56
IFT88-203ENST00000389373 DDX49Q9Y6V7 483 aaKnown RBP11.58□□□□□ -0.56
IFT88-203ENST00000389373 ARHGEF15O94989 841 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 NDUFB10O96000 172 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 SMPD1P17405 629 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 MRE11P49959 708 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 TAP1Q03518 808 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 GRB10Q13322 594 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 CHST13Q8NET6 341 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 VWCEQ96DN2 955 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 KATNBL1Q9H079 304 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 MKNK2Q9HBH9 465 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 PDGFCQ9NRA1 345 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
IFT88-203ENST00000389373 GNEQ9Y223 722 aaKnown RBP11.57□□□□□ -0.56
IFT88-203ENST00000389373 SLC4A4Q9Y6R1 1079 aa11.57□□□□□ -0.56
IFT88-203ENST00000389373 PARP14Q460N5 1801 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 SOWAHBA6NEL2 793 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 ASB14A6NK59 587 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 PFKMP08237 780 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 SUPT20HL2P0C7V6 817 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
IFT88-203ENST00000389373 NKX3-2P78367 333 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms