RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ZNF513Q8N8E2 541 aaPredicted RBP6.76□□□□□ -1.33
ERCC4-202ENST00000389138 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
ERCC4-202ENST00000389138 EDEM1Q92611 657 aa6.76□□□□□ -1.33
ERCC4-202ENST00000389138 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
ERCC4-202ENST00000389138 DDX20Q9UHI6 824 aaKnown RBP6.76□□□□□ -1.33
ERCC4-202ENST00000389138 TRHDEQ9UKU6 1024 aa6.76□□□□□ -1.33
ERCC4-202ENST00000389138 ODF2LQ9ULJ1 636 aa6.76□□□□□ -1.33
ERCC4-202ENST00000389138 TMCC3Q9ULS5 477 aa6.76□□□□□ -1.33
ERCC4-202ENST00000389138 USP47Q96K76 1375 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 TMEM229AB2RXF0 380 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 PMM2O15305 246 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 FAM153BP0C7A2 387 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 NAT2P11245 290 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 HNRNPUQ00839 825 aaKnown RBP eCLIP6.75□□□□□ -1.33
ERCC4-202ENST00000389138 STRN3Q13033 797 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 PPP2R5EQ16537 467 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 TRIM46Q7Z4K8 759 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 ETFBKMTQ8IXQ9 262 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.75□□□□□ -1.33
ERCC4-202ENST00000389138 MAPRE3Q9UPY8 281 aa6.75□□□□□ -1.33
ERCC4-202ENST00000389138 GOLGB1Q14789 3259 aaKnown RBP6.75□□□□□ -1.33
ERCC4-202ENST00000389138 ABHD14A-ACY1A0A1B0GW23 586 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 SPINT1O43278 529 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 BMP2P12643 396 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 DDIT3P35638 169 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 UBA7P41226 1012 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 PIK3CAP42336 1068 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 LAMC2Q13753 1193 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 MZT2BQ6NZ67 158 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 FAM180BQ6P0A1 224 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 NECAB2Q7Z6G3 386 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 NOC4LQ9BVI4 516 aaKnown RBP6.74□□□□□ -1.33
ERCC4-202ENST00000389138 CARD11Q9BXL7 1154 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 SLC12A5Q9H2X9 1139 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 SYNRGQ9UMZ2 1314 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 B2RBV5 119 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 APBA3O96018 575 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 SLC5A1P13866 664 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 GBP2P32456 591 aaPredicted RBP6.74□□□□□ -1.33
ERCC4-202ENST00000389138 RELBQ01201 579 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 APBA1Q02410 837 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 COL9A2Q14055 689 aaPredicted RBP6.74□□□□□ -1.33
ERCC4-202ENST00000389138 ZCCHC8Q6NZY4 707 aaKnown RBP6.74□□□□□ -1.33
ERCC4-202ENST00000389138 CSRNP2Q9H175 543 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 ALG13Q9NP73 1137 aaKnown RBP6.74□□□□□ -1.33
ERCC4-202ENST00000389138 ANLNQ9NQW6 1124 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 KCNQ5Q9NR82 932 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 KLHL11Q9NVR0 708 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 TMEM63CQ9P1W3 806 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 ZBTB21Q9ULJ3 1066 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 TMX2Q9Y320 296 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 ERBB4Q15303 1308 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 SPATA31E1Q6ZUB1 1445 aa6.74□□□□□ -1.33
ERCC4-202ENST00000389138 hCG_1642624A0A1W2PR95 340 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 C19orf81C9J6K1 198 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GREM1O60565 184 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 PPFIA3O75145 1194 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 PHKG2P15735 406 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 CAPN3P20807 821 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GARTP22102 1010 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 EPHA4P54764 986 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 KRT72Q14CN4 511 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 SPATA31A5Q5VU36 1347 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 LDHAL6AQ6ZMR3 332 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 EPM2AIP1Q7L775 607 aaPredicted RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 SRLQ86TD4 932 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 SPATA31A7Q8IWB4 1347 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 STK11IPQ8N1F8 1099 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 CEP120Q8N960 986 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 COG1Q8WTW3 980 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 POF1BQ8WVV4 589 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 HVCN1Q96D96 273 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 TMEM74Q96NL1 305 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GGNBP2Q9H3C7 697 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 MRGBPQ9NV56 204 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 PEAK1Q9H792 1746 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 PARP4Q9UKK3 1724 aaKnown RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 TRIM64CA6NLI5 447 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 J3KRW8 73 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 HMMRO75330 724 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 VAMP4O75379 141 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 HSP90AB1P08238 724 aaKnown RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GPC1P35052 558 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 ROR1Q01973 937 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 SFSWAPQ12872 951 aaKnown RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GRIN2CQ14957 1233 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 GPATCH4Q5T3I0 446 aaKnown RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 KIAA0319Q5VV43 1072 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 MRM1Q6IN84 353 aaKnown RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 CXorf57Q6NSI4 855 aaKnown RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 FAM196AQ6ZSG2 479 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 KDF1Q8NAX2 398 aaPredicted RBP6.73□□□□□ -1.33
ERCC4-202ENST00000389138 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 SH3KBP1Q96B97 665 aa6.73□□□□□ -1.33
ERCC4-202ENST00000389138 XAGE2Q96GT9 111 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms