RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
LRRK1-201ENST00000388948 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 OR52Z1P0C646 297 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 STAT1P42224 750 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
LRRK1-201ENST00000388948 DAAM2Q86T65 1068 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 PPP1R16BQ96T49 567 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 BMP3P12645 472 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 LGSNQ5TDP6 509 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 CCDC105Q8IYK2 499 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 COL4A3BPQ9Y5P4 624 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 MYL3P08590 195 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 HOXD10P28358 340 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 HADHQ16836 314 aaKnown RBP16.36■□□□□ 0.21
LRRK1-201ENST00000388948 CCDC84Q86UT8 332 aaPredicted RBP16.36■□□□□ 0.21
LRRK1-201ENST00000388948 GANCQ8TET4 914 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 ASPRV1Q53RT3 343 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 SNX25Q9H3E2 840 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 PFDN6O15212 129 aa16.36■□□□□ 0.21
LRRK1-201ENST00000388948 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
LRRK1-201ENST00000388948 PSDA5PKW4 1024 aaPredicted RBP16.35■□□□□ 0.21
LRRK1-201ENST00000388948 JAK2O60674 1132 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 ADORA1P30542 326 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 SYCE1Q8N0S2 351 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 CEP104O60308 925 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 ANKRD36BP1Q96IX9 119 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 CDHR1Q96JP9 859 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 LSM14BQ9BX40 385 aaKnown RBP16.35■□□□□ 0.21
LRRK1-201ENST00000388948 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 SATB1Q01826 763 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 ATP10DQ9P241 1426 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 TUBB4BP68371 445 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 PEX26Q7Z412 305 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 PPM1KQ8N3J5 372 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 CCDC68Q9H2F9 335 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 SARNPP82979 210 aaKnown RBP16.35■□□□□ 0.21
LRRK1-201ENST00000388948 RRAGAQ7L523 313 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 TUBB4AP04350 444 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 SLC16A2P36021 539 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
LRRK1-201ENST00000388948 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
LRRK1-201ENST00000388948 DTNBO60941 627 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 DDAH1O94760 285 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 ABCB4P21439 1286 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 MAGEA1P43355 309 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.215e-13■■■■■ 127.7
LRRK1-201ENST00000388948 N4BP1O75113 896 aaKnown RBP16.34■□□□□ 0.21
LRRK1-201ENST00000388948 IFNB1P01574 187 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 ZNF341Q9BYN7 854 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
LRRK1-201ENST00000388948 MYO5CQ9NQX4 1742 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 PDE6CP51160 858 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 ODR4Q5SWX8 454 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 HAUS1Q96CS2 278 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 ZBBXA8MT70 800 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 M0R2C6 588 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 FGAP02671 866 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 CCDC94Q9BW85 323 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-201ENST00000388948 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
LRRK1-201ENST00000388948 MARK3P27448 753 aa16.34■□□□□ 0.21
LRRK1-201ENST00000388948 SECISBP2LQ93073 1101 aaKnown RBP16.34■□□□□ 0.21
LRRK1-201ENST00000388948 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.21
LRRK1-201ENST00000388948 TBC1D8O95759 1140 aa16.33■□□□□ 0.21
LRRK1-201ENST00000388948 PSMB7Q99436 277 aa16.33■□□□□ 0.21
LRRK1-201ENST00000388948 RAB20Q9NX57 234 aa16.33■□□□□ 0.21
LRRK1-201ENST00000388948 ARMCX3Q9UH62 379 aaPredicted RBP16.33■□□□□ 0.21
LRRK1-201ENST00000388948 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 ARFGAP2Q8N6H7 521 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 ATP2A3Q93084 1043 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 VIMP08670 466 aaKnown RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 GRAPQ13588 217 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 SDCCAG8Q86SQ7 713 aaPredicted RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 CPSF3Q9UKF6 684 aaKnown RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 NFX1Q12986 1120 aaKnown RBP16.33■□□□□ 0.2
LRRK1-201ENST00000388948 BBS5Q8N3I7 341 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 NFE2L3Q9Y4A8 694 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 FYB2Q5VWT5 728 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 RIPOR2Q9Y4F9 1068 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 KCNA4P22459 653 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 USP44Q9H0E7 712 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.2
LRRK1-201ENST00000388948 TYW1BQ6NUM6 668 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms