RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
SNPH-202ENST00000381873 COL4A3BPQ9Y5P4 624 aa16.44■□□□□ 0.22
SNPH-202ENST00000381873 SH3BP5O60239 455 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 VIMP08670 466 aaKnown RBP16.43■□□□□ 0.22
SNPH-202ENST00000381873 YARSP54577 528 aaKnown RBP16.43■□□□□ 0.22
SNPH-202ENST00000381873 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
SNPH-202ENST00000381873 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 AMNQ9BXJ7 453 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 IFIH1Q9BYX4 1025 aaKnown RBP16.43■□□□□ 0.22
SNPH-202ENST00000381873 LIG4P49917 911 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 GADL1Q6ZQY3 521 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 GIPC1O14908 333 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 CMA1P23946 247 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 RXRBP28702 533 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 CFAP221Q4G0U5 840 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 SUGCTQ9HAC7 445 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 LPXNO60711 386 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 LRMPQ12912 555 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 CCDC105Q8IYK2 499 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 MRRFQ96E11 262 aaKnown RBP16.43■□□□□ 0.22
SNPH-202ENST00000381873 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 PSMB7Q99436 277 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 PALD1Q9ULE6 856 aa16.43■□□□□ 0.22
SNPH-202ENST00000381873 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
SNPH-202ENST00000381873 GMNNO75496 209 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 ADORA1P30542 326 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 ITIH3Q06033 890 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
SNPH-202ENST00000381873 TEKT3Q9BXF9 490 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 TRIM37O94972 964 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 HPDP32754 393 aaPredicted RBP16.42■□□□□ 0.22
SNPH-202ENST00000381873 NT5C2P49902 561 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 PPP2R5DQ14738 602 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 LONRF3Q496Y0 759 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 SPOUT1Q5T280 376 aaKnown RBP16.42■□□□□ 0.22
SNPH-202ENST00000381873 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 MAIP1Q8WWC4 291 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 XPO4Q9C0E2 1151 aaKnown RBP16.42■□□□□ 0.22
SNPH-202ENST00000381873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNPH-202ENST00000381873 CCPG1Q9ULG6 757 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 KIF22Q14807 665 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 INTS8Q75QN2 995 aaKnown RBP16.42■□□□□ 0.22
SNPH-202ENST00000381873 KLHL7Q8IXQ5 586 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 HAUS2Q9NVX0 235 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
SNPH-202ENST00000381873 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 DDX25Q9UHL0 483 aaKnown RBP16.41■□□□□ 0.22
SNPH-202ENST00000381873 CRCPO75575 148 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 HSPA1LP34931 641 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 LGSNQ5TDP6 509 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 TRIML1Q8N9V2 468 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
SNPH-202ENST00000381873 TMOD1P28289 359 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 FAM26FQ5R3K3 315 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 CSRNP1Q96S65 589 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 CRB1P82279 1406 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
SNPH-202ENST00000381873 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
SNPH-202ENST00000381873 METTL14Q9HCE5 456 aaKnown RBP16.41■□□□□ 0.22
SNPH-202ENST00000381873 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
SNPH-202ENST00000381873 U2AF2P26368 475 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNPH-202ENST00000381873 PTGDRQ13258 359 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 NRBP2Q9NSY0 501 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
SNPH-202ENST00000381873 PAK2Q13177 524 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 POLA2Q14181 598 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
SNPH-202ENST00000381873 N4BP1O75113 896 aaKnown RBP16.4■□□□□ 0.22
SNPH-202ENST00000381873 U2AF1L4Q8WU68 220 aaKnown RBP16.4■□□□□ 0.22
SNPH-202ENST00000381873 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
SNPH-202ENST00000381873 TMEM63CQ9P1W3 806 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 FAM184BQ9ULE4 1060 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 JCADQ9P266 1359 aa16.4■□□□□ 0.22
SNPH-202ENST00000381873 KCNJ18B7U540 433 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 K7ENM7 598 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 CNGA1P29973 690 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 KCNJ12Q14500 433 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 KCTD2Q14681 263 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 GBP6Q6ZN66 633 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 MICALL1Q8N3F8 863 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 AMFRQ9UKV5 643 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 TTLL3Q9Y4R7 772 aa16.39■□□□□ 0.22
SNPH-202ENST00000381873 CLRN2A0PK11 232 aa16.39■□□□□ 0.21
SNPH-202ENST00000381873 CASC4Q6P4E1 433 aa16.39■□□□□ 0.21
SNPH-202ENST00000381873 DCCP43146 1447 aa16.39■□□□□ 0.21
SNPH-202ENST00000381873 TNNC2P02585 160 aa16.39■□□□□ 0.21
SNPH-202ENST00000381873 PANK4Q9NVE7 773 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms