RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 BCAS4Q8TDM0 211 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 GPHNQ9NQX3 736 aaPredicted RBP15.41■□□□□ 0.06
SNPH-201ENST00000381867 HOMER3Q9NSC5 361 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 KIAA1468Q9P260 1216 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.41■□□□□ 0.06
SNPH-201ENST00000381867 PDE6AP16499 860 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 LIG3P49916 1009 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 ADALQ6DHV7 355 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 TYW1BQ6NUM6 668 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 FER1L4A9Z1Z3 1794 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 IRX4P78413 519 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 PFDN4Q9NQP4 134 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 STK10O94804 968 aaKnown RBP15.4■□□□□ 0.06
SNPH-201ENST00000381867 PPARAQ07869 468 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 PNOCQ13519 176 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 MAP3K21Q5TCX8 1036 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 ANKRD42Q8N9B4 389 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 JAK2O60674 1132 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 NPR1P16066 1061 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 TXKP42681 527 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 SMTNP53814 917 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 ZYXQ15942 572 aaKnown RBP15.4■□□□□ 0.06
SNPH-201ENST00000381867 DPY19L2Q6NUT2 758 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 MGARPQ8TDB4 240 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 EXOC7Q9UPT5 735 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 KRT25Q7Z3Z0 450 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 RNF168Q8IYW5 571 aaPredicted RBP15.4■□□□□ 0.06
SNPH-201ENST00000381867 OR8K1Q8NGG5 319 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 P3H4Q92791 437 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 CDHR2Q9BYE9 1310 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 SF3A3Q12874 501 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNPH-201ENST00000381867 LRMPQ12912 555 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 LONRF2Q1L5Z9 754 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 SH2D4BQ5SQS7 431 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 CCDC24Q8N4L8 307 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 GABPB2Q8TAK5 448 aaPredicted RBP15.4■□□□□ 0.06
SNPH-201ENST00000381867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNPH-201ENST00000381867 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 NRKQ7Z2Y5 1582 aa15.4■□□□□ 0.06
SNPH-201ENST00000381867 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 ZBED4O75132 1171 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 LUC7L3O95232 432 aaKnown RBP15.39■□□□□ 0.05
SNPH-201ENST00000381867 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
SNPH-201ENST00000381867 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 LRWD1Q9UFC0 647 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 SETD1BQ9UPS6 1966 aaKnown RBP15.39■□□□□ 0.05
SNPH-201ENST00000381867 H7C1W4 665 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 APBA1Q02410 837 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 ATP8B1O43520 1251 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 SH3BP5O60239 455 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 SNX29Q8TEQ0 813 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 AMFRQ9UKV5 643 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 BCRP11274 1271 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 SERTAD1Q9UHV2 236 aa15.39■□□□□ 0.05
SNPH-201ENST00000381867 PSDA5PKW4 1024 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNPH-201ENST00000381867 SNCBQ16143 134 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 CCDC117Q8IWD4 279 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 VPS37BQ9H9H4 285 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 ATP1A2P50993 1020 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 GRAPQ13588 217 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 TBC1D31Q96DN5 1066 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 FAM207AQ9NSI2 230 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 PFKFB1P16118 471 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 ERCC3P19447 782 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 RPAP1Q9BWH6 1393 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.38■□□□□ 0.05
SNPH-201ENST00000381867 TBC1D8O95759 1140 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 SLC1A4P43007 532 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 VCX3AQ9NNX9 186 aa15.38■□□□□ 0.05
SNPH-201ENST00000381867 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
SNPH-201ENST00000381867 PDE1CQ14123 709 aaPredicted RBP15.37■□□□□ 0.05
SNPH-201ENST00000381867 MYSM1Q5VVJ2 828 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 MAPKAPK5Q8IW41 473 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
SNPH-201ENST00000381867 RILPQ96NA2 401 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 TCP1P17987 556 aaKnown RBP15.37■□□□□ 0.05
SNPH-201ENST00000381867 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 AP1ARQ63HQ0 302 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 PHKBQ93100 1093 aa15.37■□□□□ 0.05
SNPH-201ENST00000381867 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.37■□□□□ 0.05
SNPH-201ENST00000381867 KCNJ18B7U540 433 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms