RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 PLCG1P19174 1290 aa14□□□□□ -0.17
CDX2-201ENST00000381020 RASA1P20936 1047 aa14□□□□□ -0.17
CDX2-201ENST00000381020 USP8P40818 1118 aa14□□□□□ -0.17
CDX2-201ENST00000381020 TOB1P50616 345 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 PTPAQ15257 358 aa14□□□□□ -0.17
CDX2-201ENST00000381020 ZNF772Q68DY9 489 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 GALNT17Q6IS24 598 aa14□□□□□ -0.17
CDX2-201ENST00000381020 RASGRP2Q7LDG7 609 aa14□□□□□ -0.17
CDX2-201ENST00000381020 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
CDX2-201ENST00000381020 FAM207AQ9NSI2 230 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
CDX2-201ENST00000381020 SYCP1Q15431 976 aa14□□□□□ -0.17
CDX2-201ENST00000381020 ELF2Q15723 593 aa14□□□□□ -0.17
CDX2-201ENST00000381020 ASPRV1Q53RT3 343 aa14□□□□□ -0.17
CDX2-201ENST00000381020 ZFYVE27Q5T4F4 411 aa14□□□□□ -0.17
CDX2-201ENST00000381020 SARM1Q6SZW1 724 aa14□□□□□ -0.17
CDX2-201ENST00000381020 SP8Q8IXZ3 490 aa14□□□□□ -0.17
CDX2-201ENST00000381020 EHMT1Q9H9B1 1298 aa14□□□□□ -0.17
CDX2-201ENST00000381020 TCHHQ07283 1943 aa14□□□□□ -0.17
CDX2-201ENST00000381020 USP27XA6NNY8 438 aa14□□□□□ -0.17
CDX2-201ENST00000381020 CYLC1P35663 651 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 EN1Q05925 392 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 TTLL12Q14166 644 aaPredicted RBP14□□□□□ -0.17
CDX2-201ENST00000381020 LRRC41Q15345 812 aa14□□□□□ -0.17
CDX2-201ENST00000381020 SBK1Q52WX2 424 aa14□□□□□ -0.17
CDX2-201ENST00000381020 TTBK2Q6IQ55 1244 aa14□□□□□ -0.17
CDX2-201ENST00000381020 SLC51AQ86UW1 340 aa14□□□□□ -0.17
CDX2-201ENST00000381020 NIM1KQ8IY84 436 aa14□□□□□ -0.17
CDX2-201ENST00000381020 NEDD1Q8NHV4 660 aa14□□□□□ -0.17
CDX2-201ENST00000381020 ENOX1Q8TC92 643 aaKnown RBP14□□□□□ -0.17
CDX2-201ENST00000381020 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 POLR3GO15318 223 aaPredicted RBP13.99□□□□□ -0.17
CDX2-201ENST00000381020 ERCC5P28715 1186 aaPredicted RBP13.99□□□□□ -0.17
CDX2-201ENST00000381020 CASP14P31944 242 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 GRM4Q14833 912 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 SEPT2Q15019 361 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 CCDC65Q8IXS2 484 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 CAPZA3Q96KX2 299 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 CCDC17Q96LX7 622 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 PI4KBQ9UBF8 816 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 ANAPC4Q9UJX5 808 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
CDX2-201ENST00000381020 BCS1LQ9Y276 419 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 MACROD2A1Z1Q3 448 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 CDC25BP30305 580 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 DCAF17Q5H9S7 520 aaPredicted RBP13.99□□□□□ -0.17
CDX2-201ENST00000381020 FBXO11Q86XK2 927 aa13.99□□□□□ -0.17
CDX2-201ENST00000381020 USP17L10C9JJH3 530 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 GH2P01242 217 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 NOP2P46087 812 aaKnown RBP13.98□□□□□ -0.17
CDX2-201ENST00000381020 EARS2Q5JPH6 523 aaKnown RBP13.98□□□□□ -0.17
CDX2-201ENST00000381020 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 CNTNAP5Q8WYK1 1306 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 POTEMA6NI47 508 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 FAM13AO94988 1023 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
CDX2-201ENST00000381020 POLD1P28340 1107 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 MCM6Q14566 821 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 CCDC122Q5T0U0 273 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 ATP6V0A2Q9Y487 856 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 ECE2O60344 883 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
CDX2-201ENST00000381020 SUPT20HQ8NEM7 779 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 POLD4Q9HCU8 107 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 DISC1Q9NRI5 854 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 BARHL2Q9NY43 387 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 SCAF8Q9UPN6 1271 aaKnown RBP13.98□□□□□ -0.17
CDX2-201ENST00000381020 KIAA1024Q9UPX6 916 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 PPP2R2CQ9Y2T4 447 aa13.98□□□□□ -0.17
CDX2-201ENST00000381020 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 ERLIN1O75477 346 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 BAG6P46379 1132 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 FMR1Q06787 632 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDX2-201ENST00000381020 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 NSMFQ6X4W1 530 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 PODNQ7Z5L7 613 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 FBXL16Q8N461 479 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 CCDC102AQ96A19 550 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 CRAMP1Q96RY5 1269 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 CRACR2AQ9BSW2 395 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
CDX2-201ENST00000381020 ETF1P62495 437 aaKnown RBP13.97□□□□□ -0.17
CDX2-201ENST00000381020 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
CDX2-201ENST00000381020 COPB1P53618 953 aaKnown RBP13.97□□□□□ -0.17
CDX2-201ENST00000381020 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 RBL2Q08999 1139 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms