RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ACVR2BQ13705 512 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 SHHQ15465 462 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 C9orf50Q5SZB4 431 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 RASGRP2Q7LDG7 609 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 FAM160B2Q86V87 743 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 KLHDC9Q8NEP7 349 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 CHURC1Q8WUH1 139 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 STAG1Q8WVM7 1258 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 TSEN34Q9BSV6 310 aaKnown RBP19.99■□□□□ 0.79
SMN2-201ENST00000380741 STXBP5LQ9Y2K9 1186 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 ZNF536O15090 1300 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 POTEB2H3BUK9 544 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ADCY6O43306 1168 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 PQBP1O60828 265 aaKnown RBP19.98■□□□□ 0.79
SMN2-201ENST00000380741 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
SMN2-201ENST00000380741 CLTBP09497 229 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ITGB8P26012 769 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ACLYP53396 1101 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 KCTD1Q719H9 257 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ARMCX2Q7L311 632 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ABHD16BQ9H3Z7 469 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ACAD9Q9H845 621 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 HELLSQ9NRZ9 838 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 ANAPC4Q9UJX5 808 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 EYSQ5T1H1 3165 aa19.98■□□□□ 0.79
SMN2-201ENST00000380741 RANBP6O60518 1105 aaKnown RBP19.97■□□□□ 0.79
SMN2-201ENST00000380741 CNTN2Q02246 1040 aa19.97■□□□□ 0.79
SMN2-201ENST00000380741 CCDC144BQ3MJ40 725 aa19.97■□□□□ 0.79
SMN2-201ENST00000380741 CCSAPQ6IQ19 270 aaPredicted RBP19.97■□□□□ 0.79
SMN2-201ENST00000380741 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
SMN2-201ENST00000380741 FAM227BQ96M60 508 aa19.97■□□□□ 0.79
SMN2-201ENST00000380741 STARD7Q9NQZ5 370 aa19.97■□□□□ 0.79
SMN2-201ENST00000380741 RNF146Q9NTX7 359 aa19.97■□□□□ 0.79
SMN2-201ENST00000380741 A0A0D9SFI3 127 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 MOXD2PA6NHM9 499 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 PLA2G6O60733 806 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 IRX5P78411 483 aaPredicted RBP19.96■□□□□ 0.79
SMN2-201ENST00000380741 KCNA10Q16322 511 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 FAM109BQ6ICB4 259 aaPredicted RBP19.96■□□□□ 0.79
SMN2-201ENST00000380741 RCSD1Q6JBY9 416 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 FAM133AQ8N9E0 248 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 NUP133Q8WUM0 1156 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 KATNBL1Q9H079 304 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 A1CFQ9NQ94 594 aaKnown RBP19.96■□□□□ 0.79
SMN2-201ENST00000380741 LRRC37A2A6NM11 1700 aa19.96■□□□□ 0.79
SMN2-201ENST00000380741 KIAA0355O15063 1070 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 ORC4O43929 436 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 C6orf222P0C671 652 aaPredicted RBP19.95■□□□□ 0.78
SMN2-201ENST00000380741 CST5P28325 142 aaPredicted RBP19.95■□□□□ 0.78
SMN2-201ENST00000380741 NOVP48745 357 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 SNAP25P60880 206 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 ALX1Q15699 326 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 CCDC174Q6PII3 467 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 ANKRD33Q7Z3H0 272 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 PRR12Q9ULL5 1215 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 MTMR7Q9Y216 660 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 LCTP09848 1927 aa19.95■□□□□ 0.78
SMN2-201ENST00000380741 FGAP02671 866 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 FGRP09769 529 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 ALAS1P13196 640 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 RAG1P15918 1043 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 FAAP100Q0VG06 881 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 MCMDC2Q4G0Z9 681 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 FAM161BQ96MY7 647 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 TOX2Q96NM4 488 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 GUCD1Q96NT3 240 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 TRERF1Q96PN7 1200 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 UPF3AQ9H1J1 476 aaKnown RBP19.94■□□□□ 0.78
SMN2-201ENST00000380741 TMEM39AQ9NV64 488 aa19.94■□□□□ 0.78
SMN2-201ENST00000380741 SOWAHBA6NEL2 793 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 ASGR1P07306 291 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 EPHB4P54760 987 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 GJA9P57773 515 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 ZNF589Q86UQ0 364 aaPredicted RBP19.93■□□□□ 0.78
SMN2-201ENST00000380741 PCSK9Q8NBP7 692 aaKnown RBP19.93■□□□□ 0.78
SMN2-201ENST00000380741 GLT1D1Q96MS3 346 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 LNPKQ9C0E8 428 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 SPC25Q9HBM1 224 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 TOMM22Q9NS69 142 aa19.93■□□□□ 0.78
SMN2-201ENST00000380741 DCDC2CA8MYV0 355 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 HSPD1P10809 573 aaKnown RBP19.92■□□□□ 0.78
SMN2-201ENST00000380741 NMIQ13287 307 aaPredicted RBP19.92■□□□□ 0.78
SMN2-201ENST00000380741 CCDC96Q2M329 555 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 MUM1L1Q5H9M0 696 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 RRP12Q5JTH9 1297 aaKnown RBP19.92■□□□□ 0.78
SMN2-201ENST00000380741 ZNF697Q5TEC3 545 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 DCAF4Q8WV16 495 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 ASTN1O14525 1302 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 ELP1O95163 1332 aa19.92■□□□□ 0.78
SMN2-201ENST00000380741 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.91■□□□□ 0.78
SMN2-201ENST00000380741 CTAGE5O15320 804 aa19.91■□□□□ 0.78
SMN2-201ENST00000380741 GNASQ5JWF2 1037 aa19.91■□□□□ 0.78
SMN2-201ENST00000380741 TICAM2Q86XR7 235 aa19.91■□□□□ 0.78
SMN2-201ENST00000380741 CCPG1Q9ULG6 757 aa19.91■□□□□ 0.78
SMN2-201ENST00000380741 DDX49Q9Y6V7 483 aaKnown RBP19.91■□□□□ 0.78
SMN2-201ENST00000380741 ZMYM6O95789 1325 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms