RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ZNF536O15090 1300 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 SMARCA1P28370 1054 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 ERVK-9P63128 1117 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 ERVK-24P63145 666 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 NTRK3Q16288 839 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 CCDC174Q6PII3 467 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 GPRC5AQ8NFJ5 357 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 MTMR8Q96EF0 704 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 MORF4L1Q9UBU8 362 aa14.71□□□□□ -0.06
SMN1-202ENST00000380707 ZNF214Q9UL59 606 aaPredicted RBP14.71□□□□□ -0.06
SMN1-202ENST00000380707 PPFIA3O75145 1194 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 FDX1P10109 184 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 PLS1Q14651 629 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 CDC37Q16543 378 aaPredicted RBP14.7□□□□□ -0.06
SMN1-202ENST00000380707 FAM110CQ1W6H9 321 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 CPXCR1Q8N123 301 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 PIBF1Q8WXW3 757 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 GTF3C6Q969F1 213 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 AGBL1Q96MI9 1066 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 PIGSQ96S52 555 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 SPATC1LQ9H0A9 340 aa14.7□□□□□ -0.06
SMN1-202ENST00000380707 RAVER2Q9HCJ3 691 aaKnown RBP14.7□□□□□ -0.06
SMN1-202ENST00000380707 CTDP1Q9Y5B0 961 aaPredicted RBP14.7□□□□□ -0.06
SMN1-202ENST00000380707 COL11A1P12107 1806 aaPredicted RBP14.7□□□□□ -0.06
SMN1-202ENST00000380707 CNTNAP5Q8WYK1 1306 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 hCG_1642624A0A1W2PR95 340 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 ATP2A1O14983 1001 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 ZBTB5O15062 677 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 DTNBO60941 627 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 STAT3P40763 770 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 MCM2P49736 904 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 ST3GAL1Q11201 340 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 QRICH1Q2TAL8 776 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 HOMER1Q86YM7 354 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 PHKBQ93100 1093 aa14.69□□□□□ -0.06
SMN1-202ENST00000380707 ZSCAN31Q96LW9 406 aaPredicted RBP14.69□□□□□ -0.06
SMN1-202ENST00000380707 GPR25O00155 361 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 PPP1R11O60927 126 aaPredicted RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 CTDNEP1O95476 244 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 ICAM1P05362 532 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 IFNAR1P17181 557 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 TAL1P17542 331 aaPredicted RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 OAZ1P54368 228 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 SNRNP48Q6IEG0 339 aaKnown RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 RRP36Q96EU6 259 aaKnown RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 TMX3Q96JJ7 454 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 MOV10L1Q9BXT6 1211 aaKnown RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 TEX13BQ9BXU2 312 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 PORCNQ9H237 461 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 SH2B1Q9NRF2 756 aaPredicted RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 RIPK3Q9Y572 518 aa14.68□□□□□ -0.06
SMN1-202ENST00000380707 V9GY48 417 aaPredicted RBP14.68□□□□□ -0.06
SMN1-202ENST00000380707 PNMA6FA0A0J9YX94 578 aa14.67□□□□□ -0.06
SMN1-202ENST00000380707 CPLX1O14810 134 aa14.67□□□□□ -0.06
SMN1-202ENST00000380707 FOXN1O15353 648 aa14.67□□□□□ -0.06
SMN1-202ENST00000380707 SLC4A3P48751 1232 aa14.67□□□□□ -0.06
SMN1-202ENST00000380707 SP3Q02447 781 aa14.67□□□□□ -0.06
SMN1-202ENST00000380707 CCDC83Q8IWF9 413 aa14.67□□□□□ -0.06
SMN1-202ENST00000380707 ECM2O94769 699 aaPredicted RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 HSPA1AP0DMV8 641 aaKnown RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 HSPA1BP0DMV9 641 aaKnown RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 CAP1Q01518 475 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 USH1GQ495M9 461 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 NOM1Q5C9Z4 860 aaKnown RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 RIOX2Q8IUF8 465 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 ZNF296Q8WUU4 475 aaPredicted RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 SNX21Q969T3 373 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 SLC26A6Q9BXS9 759 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 EFCC1Q9HA90 598 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 CCPG1Q9ULG6 757 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 PRPF3O43395 683 aaKnown RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 ERCC3P19447 782 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 CTGFP29279 349 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 CCNA1P78396 465 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 LACTBP83111 547 aaPredicted RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 CPLX2Q6PUV4 134 aaKnown RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 FBXO11Q86XK2 927 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 AMNQ9BXJ7 453 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 ARHGAP39Q9C0H5 1083 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 HOMER2Q9NSB8 354 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 SEC63Q9UGP8 760 aaKnown RBP14.66□□□□□ -0.06
SMN1-202ENST00000380707 SMCHD1A6NHR9 2005 aa14.66□□□□□ -0.06
SMN1-202ENST00000380707 CDKL5O76039 1030 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
SMN1-202ENST00000380707 SLC25A27O95847 323 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 ALAS1P13196 640 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 SSRP1Q08945 709 aaKnown RBP14.65□□□□□ -0.06
SMN1-202ENST00000380707 PKN1Q16512 942 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 NSUN7Q8NE18 718 aaKnown RBP14.65□□□□□ -0.06
SMN1-202ENST00000380707 COA7Q96BR5 231 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 TRERF1Q96PN7 1200 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 RNF26Q9BY78 433 aaPredicted RBP14.65□□□□□ -0.06
SMN1-202ENST00000380707 PCDHA1Q9Y5I3 950 aa14.65□□□□□ -0.06
SMN1-202ENST00000380707 JAK2O60674 1132 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 FKTNO75072 461 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
SMN1-202ENST00000380707 MUM1L1Q5H9M0 696 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms