RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 COA7Q96BR5 231 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
HERPUD1-203ENST00000379792 ZBTB48P10074 688 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 CETPP11597 493 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 BRI3BPQ8WY22 251 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 CHMP5Q9NZZ3 219 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 PPP1R9AQ9ULJ8 1098 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 MTMR6Q9Y217 621 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 COG2Q14746 738 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 KRT40Q6A162 431 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
HERPUD1-203ENST00000379792 PTPRFP10586 1907 aa16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 FAM155AB1AL88 458 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 STXBP3O00186 592 aa16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 DSG3P32926 999 aa16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 TRIM29Q14134 588 aa16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-203ENST00000379792 PEX10O60683 326 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 AOC2O75106 756 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 SLC10A3P09131 477 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 USH1GQ495M9 461 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 CPXCR1Q8N123 301 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 ASCC2Q9H1I8 757 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 BARHL2Q9NY43 387 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 SPDYE16A6NNV3 312 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 BTBD19C9JJ37 291 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 VWA5AO00534 786 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 ADAMTS3O15072 1205 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 NAPAP54920 295 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 PTPN18Q99952 460 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 RAVER2Q9HCJ3 691 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
HERPUD1-203ENST00000379792 ZBED4O75132 1171 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 BRD1O95696 1058 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 XBP1P17861 261 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 NLRP5P59047 1200 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 BEGAINQ9BUH8 593 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 HOXC10Q9NYD6 342 aa16.25■□□□□ 0.19
HERPUD1-203ENST00000379792 ZNF536O15090 1300 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 PDHXO00330 501 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 CTCFP49711 727 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 NUCB2P80303 420 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 FAM43AQ8N2R8 423 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 OXER1Q8TDS5 423 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 PHF20Q9BVI0 1012 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 MYH6P13533 1939 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
HERPUD1-203ENST00000379792 FOXN1O15353 648 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 MMP1P03956 469 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 CYP2C8P10632 490 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 OSBPP22059 807 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 ADAMTS5Q9UNA0 930 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 MANSC4A6NHS7 340 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 BTBD18B2RXH4 712 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 KIF28PB7ZC32 967 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 CA12O43570 354 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 HERVK_113P62684 666 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 PABPC4Q13310 644 aaKnown RBP eCLIP16.23■□□□□ 0.192e-12■■■■■ 31.3
HERPUD1-203ENST00000379792 PLS1Q14651 629 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 TMEM132BQ14DG7 1078 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 ANKRD23Q86SG2 305 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 REPS2Q8NFH8 660 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
HERPUD1-203ENST00000379792 ICAM1P05362 532 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 NR5A1Q13285 461 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 NPY5RQ15761 445 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 PAGR1Q9BTK6 254 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 HOMER2Q9NSB8 354 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 BTBD7Q9P203 1132 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 RLFQ13129 1914 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 MYPNQ86TC9 1320 aa16.22■□□□□ 0.19
HERPUD1-203ENST00000379792 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-203ENST00000379792 IGF2BP3O00425 579 aaKnown RBP eCLIP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms