RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 LLPHQ9BRT6 129 aaKnown RBP28.31■■■□□ 2.12
TM6SF1-204ENST00000379390 PAGR1Q9BTK6 254 aa28.31■■■□□ 2.12
TM6SF1-204ENST00000379390 SEC63Q9UGP8 760 aaKnown RBP28.31■■■□□ 2.12
TM6SF1-204ENST00000379390 ZBTB5O15062 677 aa28.3■■■□□ 2.12
TM6SF1-204ENST00000379390 TAL1P17542 331 aaPredicted RBP28.3■■■□□ 2.12
TM6SF1-204ENST00000379390 LBX2Q6XYB7 198 aa28.3■■■□□ 2.12
TM6SF1-204ENST00000379390 CTDP1Q9Y5B0 961 aaPredicted RBP28.3■■■□□ 2.12
TM6SF1-204ENST00000379390 ZBED4O75132 1171 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 AKAP17AQ02040 695 aaKnown RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 CPXCR1Q8N123 301 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 SPRYD3Q8NCJ5 442 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 REPS2Q8NFH8 660 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 ORC3Q9UBD5 711 aaPredicted RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 RBBP6Q7Z6E9 1792 aaKnown RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 PRPF3O43395 683 aaKnown RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 PPP1R11O60927 126 aaPredicted RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 HSP90AA1P07900 732 aaKnown RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 SLC4A3P48751 1232 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 TMEM132BQ14DG7 1078 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 SMARCC2Q8TAQ2 1214 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 RAVER2Q9HCJ3 691 aaKnown RBP28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 TXNRD2Q9NNW7 524 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 BTBD7Q9P203 1132 aa28.29■■■□□ 2.12
TM6SF1-204ENST00000379390 STK36Q9NRP7 1315 aa28.28■■■□□ 2.12
TM6SF1-204ENST00000379390 PNMA6FA0A0J9YX94 578 aa28.28■■■□□ 2.12
TM6SF1-204ENST00000379390 CRHR2Q13324 411 aa28.28■■■□□ 2.12
TM6SF1-204ENST00000379390 PLS1Q14651 629 aa28.28■■■□□ 2.12
TM6SF1-204ENST00000379390 ZNF214Q9UL59 606 aaPredicted RBP28.28■■■□□ 2.12
TM6SF1-204ENST00000379390 ZNF536O15090 1300 aa28.28■■■□□ 2.12
TM6SF1-204ENST00000379390 FDX1P10109 184 aa28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 FDPSP14324 419 aaKnown RBP28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 PKN1Q16512 942 aa28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 MB21D1Q8N884 522 aa28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 GPKOWQ92917 476 aaPredicted RBP eCLIP28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 AIFM3Q96NN9 605 aa28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 RBPJLQ9UBG7 517 aa28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 ADGRA2Q96PE1 1338 aa28.27■■■□□ 2.12
TM6SF1-204ENST00000379390 CNMDO75829 334 aa28.26■■■□□ 2.11
TM6SF1-204ENST00000379390 ALDH1A1P00352 501 aa28.26■■■□□ 2.11
TM6SF1-204ENST00000379390 USH1GQ495M9 461 aa28.26■■■□□ 2.11
TM6SF1-204ENST00000379390 ANKRD13CQ8N6S4 541 aa28.26■■■□□ 2.11
TM6SF1-204ENST00000379390 AGBL1Q96MI9 1066 aa28.26■■■□□ 2.11
TM6SF1-204ENST00000379390 SMC3Q9UQE7 1217 aa28.26■■■□□ 2.11
TM6SF1-204ENST00000379390 DEXIO95424 95 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 HEATR3Q7Z4Q2 680 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 DNAJC5GQ8N7S2 189 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 ZFYVE28Q9HCC9 887 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 RBM27Q9P2N5 1060 aaKnown RBP28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 CPA4Q9UI42 421 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 RABGAP1Q9Y3P9 1069 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 CA12O43570 354 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 ICAM1P05362 532 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 SCG2P13521 617 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 GCLCP48506 637 aaPredicted RBP28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 PFKFB3Q16875 520 aaPredicted RBP28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 FBXO11Q86XK2 927 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 GTF3C2Q8WUA4 911 aaPredicted RBP28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 INTS4Q96HW7 963 aaKnown RBP28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 CCPG1Q9ULG6 757 aa28.25■■■□□ 2.11
TM6SF1-204ENST00000379390 GJB2P29033 226 aa28.24■■■□□ 2.11
TM6SF1-204ENST00000379390 HMGN5P82970 282 aaKnown RBP28.24■■■□□ 2.11
TM6SF1-204ENST00000379390 WWC2Q6AWC2 1192 aa28.24■■■□□ 2.11
TM6SF1-204ENST00000379390 SNRNP48Q6IEG0 339 aaKnown RBP28.24■■■□□ 2.11
TM6SF1-204ENST00000379390 COA7Q96BR5 231 aa28.24■■■□□ 2.11
TM6SF1-204ENST00000379390 AMNQ9BXJ7 453 aa28.24■■■□□ 2.11
TM6SF1-204ENST00000379390 TLR2O60603 784 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 TRPA1O75762 1119 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 FOSBP53539 338 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 TEX13BQ9BXU2 312 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 R3HDMLQ9H3Y0 253 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 RNF186Q9NXI6 227 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 MGAMO43451 1857 aa28.23■■■□□ 2.11
TM6SF1-204ENST00000379390 OAZ1P54368 228 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 ERVK-9P63128 1117 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 ERVK-24P63145 666 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 SPATC1LQ9H0A9 340 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 HOMER2Q9NSB8 354 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 PCDHA1Q9Y5I3 950 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 PLXNB2O15031 1838 aa28.22■■■□□ 2.11
TM6SF1-204ENST00000379390 ATP2A1O14983 1001 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 STAT3P40763 770 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 Q3C1V9 767 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 FAM184AQ8NB25 1140 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 ALG1Q9BT22 464 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 RIPK3Q9Y572 518 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 ZSWIM8A7E2V4 1837 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 ZNFX1Q9P2E3 1918 aaKnown RBP28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 DOCK3Q8IZD9 2030 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 TBC1D8O95759 1140 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 ALAS1P13196 640 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 TYW1BQ6NUM6 668 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 GJB4Q9NTQ9 266 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 VPS54Q9P1Q0 977 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 MORF4L1Q9UBU8 362 aa28.21■■■□□ 2.11
TM6SF1-204ENST00000379390 STXBP3O00186 592 aa28.2■■■□□ 2.1
TM6SF1-204ENST00000379390 BCRP11274 1271 aa28.2■■■□□ 2.1
TM6SF1-204ENST00000379390 FAM110CQ1W6H9 321 aa28.2■■■□□ 2.1
TM6SF1-204ENST00000379390 GPRC5AQ8NFJ5 357 aa28.2■■■□□ 2.1
TM6SF1-204ENST00000379390 SHISA4Q96DD7 197 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms