RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 TMEM165Q9HC07 324 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 SNX12Q9UMY4 172 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 PNPLA6Q8IY17 1366 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 AHCYL1O43865 530 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 SUN1O94901 812 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 RAD23BP54727 409 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 CSGALNACT2Q8N6G5 542 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 EZH1Q92800 747 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-202ENST00000379237 DDX23Q9BUQ8 820 aaKnown RBP12.06□□□□□ -0.48
USP6NL-202ENST00000379237 ECT2Q9H8V3 914 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 IDH1O75874 414 aaKnown RBP12.06□□□□□ -0.48
USP6NL-202ENST00000379237 CHGBP05060 677 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 USP4Q13107 963 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 ACBD5Q5T8D3 534 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-202ENST00000379237 CSRNP2Q9H175 543 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 DLGAP2Q9P1A6 1054 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 EHHADHQ08426 723 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 IDI1Q13907 227 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 ZNF174Q15697 407 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 ANKRD42Q8N9B4 389 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP6NL-202ENST00000379237 STMN4Q9H169 189 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-202ENST00000379237 TSKSQ9UJT2 592 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 LEMD3Q9Y2U8 911 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 MYOM1P52179 1685 aa12.06□□□□□ -0.48
USP6NL-202ENST00000379237 ATXN2Q99700 1313 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 RNF113AO15541 343 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 RASSF7Q02833 373 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KSR2Q6VAB6 950 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 CCDC25Q86WR0 208 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KIAA0825Q8IV33 1275 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 PLIN2Q99541 437 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 DSCC1Q9BVC3 393 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 FAM114A2Q9NRY5 505 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 B4DLN1 442 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 FLOT1O75955 427 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 SASH1O94885 1247 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 FDPSP14324 419 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 BIRC3Q13489 604 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 FOXP4Q8IVH2 680 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KCNK3O14649 394 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 ROR2Q01974 943 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 STMN2Q93045 179 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 CNOT10Q9H9A5 744 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KLHL14Q9P2G3 628 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 ATP8A1Q9Y2Q0 1164 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 DNM1LO00429 736 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 FTCDO95954 541 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 PARP1P09874 1014 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 ATP4AP20648 1035 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 DNM2P50570 870 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KLC1Q07866 573 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 SEPT7Q16181 437 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 SH2D4BQ5SQS7 431 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 RRAGAQ7L523 313 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 KRT26Q7Z3Y9 468 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 MYLK4Q86YV6 388 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 MMGT1Q8N4V1 131 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 NAF1Q96HR8 494 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 RBM12Q9NTZ6 932 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 CORO1CQ9ULV4 474 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
USP6NL-202ENST00000379237 DUSP10Q9Y6W6 482 aa12.05□□□□□ -0.48
USP6NL-202ENST00000379237 DHX9Q08211 1270 aaKnown RBP12.04□□□□□ -0.48
USP6NL-202ENST00000379237 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 TRPM2O94759 1503 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 PDE2AO00408 941 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-202ENST00000379237 ZNF18P17022 549 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 EVA1CP58658 441 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 MAP7Q14244 749 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 PAPD7Q5XG87 772 aaKnown RBP12.04□□□□□ -0.48
USP6NL-202ENST00000379237 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-202ENST00000379237 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 RAPGEF5Q92565 580 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 IGF2BP3O00425 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
USP6NL-202ENST00000379237 MARCH6O60337 910 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 TIMM10P62072 90 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 MRPS35P82673 323 aaKnown RBP12.04□□□□□ -0.48
USP6NL-202ENST00000379237 C11orf91Q3C1V1 193 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 MIS18BP1Q6P0N0 1132 aa12.04□□□□□ -0.48
USP6NL-202ENST00000379237 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-202ENST00000379237 UBA7P41226 1012 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms