RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ARHGEF16Q5VV41 709 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 TEX11Q8IYF3 940 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CCDC90BQ9GZT6 254 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 AMFRQ9UKV5 643 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 FLCNQ8NFG4 579 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CARD6Q9BX69 1037 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 RAD18Q9NS91 495 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 THOC5Q13769 683 aaKnown RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 CCNYQ8ND76 341 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 EFHD1Q9BUP0 239 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 CHPF2Q9P2E5 772 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 TESPA1A2RU30 521 aaPredicted RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 ANP32DO95626 131 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 SRGAP2BP0DMP2 458 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 SLC8A1P32418 973 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 BFSP1Q12934 665 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 CEP70Q8NHQ1 597 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 PRR23D1E9PI22 279 aaPredicted RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 PRR23D2P0DMB1 279 aaPredicted RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 FRA10AC1Q70Z53 315 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 OTUD6AQ7L8S5 288 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 U2AF1L4Q8WU68 220 aaKnown RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 PSMC1P62191 440 aaKnown RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 USP6NLQ92738 828 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 SLC5A4Q9NY91 659 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 CREB3O43889 395 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 GPR162Q16538 588 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 NAF1Q96HR8 494 aaKnown RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 OGFRQ9NZT2 677 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 KRT14P02533 472 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 VCAM1P19320 739 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 PATL1Q86TB9 770 aaKnown RBP14.49□□□□□ -0.09
HIPK3-202ENST00000379016 TMX3Q96JJ7 454 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 ADPGKQ9BRR6 497 aa14.49□□□□□ -0.09
HIPK3-202ENST00000379016 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 MCF2P10911 925 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 MAP7D3Q8IWC1 876 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 CDCA7Q9BWT1 371 aaPredicted RBP14.48□□□□□ -0.09
HIPK3-202ENST00000379016 HESX1Q9UBX0 185 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 FBXL5Q9UKA1 691 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 RTCBQ9Y3I0 505 aaKnown RBP14.48□□□□□ -0.09
HIPK3-202ENST00000379016 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 DLATP10515 647 aaKnown RBP14.48□□□□□ -0.09
HIPK3-202ENST00000379016 HADHAP40939 763 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 LIG4P49917 911 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 KIAA2013Q8IYS2 634 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 EYA3Q99504 573 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 GRIN1Q05586 938 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 SFMBT2Q5VUG0 894 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 DPH5Q9H2P9 285 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 SUGCTQ9HAC7 445 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 FLOT1O75955 427 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 RFX6Q8HWS3 928 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 HINFPQ9BQA5 517 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 WARS2Q9UGM6 360 aaKnown RBP14.48□□□□□ -0.09
HIPK3-202ENST00000379016 EIF3CLB5ME19 914 aaKnown RBP14.48□□□□□ -0.09
HIPK3-202ENST00000379016 KCNK3O14649 394 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 TOM1L1O75674 476 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 PLCD1P51178 756 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 C16orf72Q14CZ0 275 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 CALCRLQ16602 461 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 PHACTR3Q96KR7 559 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 WIZO95785 1651 aa14.48□□□□□ -0.09
HIPK3-202ENST00000379016 ARHGAP6O43182 974 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 ACTN1P12814 892 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 NEK2P51955 445 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 CHMP1BQ7LBR1 199 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 TRIML1Q8N9V2 468 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 C6orf203Q9P0P8 240 aaPredicted RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 TUBBP07437 444 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 PTPREP23469 700 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 CAPZA2P47755 286 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 RCSD1Q6JBY9 416 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 NLRC4Q9NPP4 1024 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 DDX28Q9NUL7 540 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 HSPA8P11142 646 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 TMOD1P28289 359 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 TBC1D32Q96NH3 1257 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 KRIT1O00522 736 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 TLR3O15455 904 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 PIK3CAP42336 1068 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 MED4Q9NPJ6 270 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 ZNF148Q9UQR1 794 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 LUC7L3O95232 432 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 KRT17Q04695 432 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 XAGE3Q8WTP9 111 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 SATB2Q9UPW6 733 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 ZFXP17010 805 aaPredicted RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 TBL3Q12788 808 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 AARS2Q5JTZ9 985 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 NLRX1Q86UT6 975 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 LSM14BQ9BX40 385 aaKnown RBP14.47□□□□□ -0.09
HIPK3-202ENST00000379016 SLC12A6Q9UHW9 1150 aa14.47□□□□□ -0.09
HIPK3-202ENST00000379016 NEMP1O14524 444 aa14.46□□□□□ -0.09
HIPK3-202ENST00000379016 APOA4P06727 396 aa14.46□□□□□ -0.09
HIPK3-202ENST00000379016 HYOU1Q9Y4L1 999 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms