RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NBPF11Q86T75 865 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 CCAR1Q8IX12 1150 aaKnown RBP21.82■■□□□ 1.08
SSU72-203ENST00000378725 COA7Q96BR5 231 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 MTMR8Q96EF0 704 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 LZTS2Q9BRK4 669 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 JMJD4Q9H9V9 463 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 SRRDQ9UH36 339 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 RIPK3Q9Y572 518 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 STRNO43815 780 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 ICAM1P05362 532 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 RXRAP19793 462 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 COL13A1Q5TAT6 717 aaPredicted RBP21.81■■□□□ 1.08
SSU72-203ENST00000378725 CCDC174Q6PII3 467 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 NCAPG2Q86XI2 1143 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 AGBL1Q96MI9 1066 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 PNMA2Q9UL42 364 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 PTPN22Q9Y2R2 807 aa21.81■■□□□ 1.08
SSU72-203ENST00000378725 CYTH3O43739 400 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 PTPREP23469 700 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 PPP2R5BQ15173 497 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 TKFCQ3LXA3 575 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 MORN1Q5T089 497 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.8■■□□□ 1.082e-6■■■□□ 17.8
SSU72-203ENST00000378725 MICU3Q86XE3 530 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 RAB11FIP4Q86YS3 637 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 USP6NLQ92738 828 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 FAM217BQ9NTX9 383 aaPredicted RBP21.8■■□□□ 1.08
SSU72-203ENST00000378725 GABRQQ9UN88 632 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 HPS5Q9UPZ3 1129 aa21.8■■□□□ 1.08
SSU72-203ENST00000378725 SLC15A5A6NIM6 579 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 PRKCZQ05513 592 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 CCDC144CPQ8IYA2 1237 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 ABRAQ8N0Z2 381 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
SSU72-203ENST00000378725 CHST13Q8NET6 341 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 ZNF274Q96GC6 653 aaPredicted RBP21.79■■□□□ 1.08
SSU72-203ENST00000378725 TBC1D32Q96NH3 1257 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 SPZ1Q9BXG8 430 aa21.79■■□□□ 1.08
SSU72-203ENST00000378725 RBM28Q9NW13 759 aaKnown RBP21.79■■□□□ 1.08
SSU72-203ENST00000378725 NID2Q14112 1375 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 PDIA3P30101 505 aaKnown RBP21.78■■□□□ 1.08
SSU72-203ENST00000378725 FLT3LGP49771 235 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 NEK4P51957 841 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 GRB14Q14449 540 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 CDC37Q16543 378 aaPredicted RBP21.78■■□□□ 1.08
SSU72-203ENST00000378725 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 TMTC3Q6ZXV5 915 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 NUDT12Q9BQG2 462 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 FBXO40Q9UH90 709 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 CCPG1Q9ULG6 757 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 ZSWIM8A7E2V4 1837 aa21.78■■□□□ 1.08
SSU72-203ENST00000378725 COL11A1P12107 1806 aaPredicted RBP21.78■■□□□ 1.08
SSU72-203ENST00000378725 GOLGA8AA7E2F4 631 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 GOLGA8BA8MQT2 603 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 DHX16O60231 1041 aaKnown RBP21.77■■□□□ 1.08
SSU72-203ENST00000378725 PLEKHA8P1O95397 391 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 IRF5Q13568 498 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 ANKRD1Q15327 319 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 RTN1Q16799 776 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 QRICH1Q2TAL8 776 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 FBXO46Q6PJ61 603 aaPredicted RBP21.77■■□□□ 1.08
SSU72-203ENST00000378725 SOCS4Q8WXH5 440 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 CWC22Q9HCG8 908 aaKnown RBP21.77■■□□□ 1.08
SSU72-203ENST00000378725 IVNS1ABPQ9Y6Y0 642 aa21.77■■□□□ 1.08
SSU72-203ENST00000378725 ZBTB5O15062 677 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 MGAMO43451 1857 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 FCER1AP12319 257 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 CDC27P30260 824 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 SLC4A3P48751 1232 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 METAP2P50579 478 aaKnown RBP eCLIP21.76■■□□□ 1.07
SSU72-203ENST00000378725 AK2P54819 239 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 FUT2Q10981 343 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 TRERF1Q96PN7 1200 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 LARP6Q9BRS8 491 aaKnown RBP21.76■■□□□ 1.07
SSU72-203ENST00000378725 MCOLN1Q9GZU1 580 aa21.76■■□□□ 1.07
SSU72-203ENST00000378725 NAP1L2Q9ULW6 460 aaPredicted RBP21.76■■□□□ 1.07
SSU72-203ENST00000378725 CCDC196A0A1B0GTZ2 297 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 XRCC5P13010 732 aaKnown RBP21.75■■□□□ 1.07
SSU72-203ENST00000378725 ALAS1P13196 640 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 MAP2K5Q13163 448 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 FBXO11Q86XK2 927 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 CMTR1Q8N1G2 835 aaKnown RBP21.75■■□□□ 1.07
SSU72-203ENST00000378725 IL27Q8NEV9 243 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 PIGSQ96S52 555 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 MMP19Q99542 508 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 RNF146Q9NTX7 359 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 PTCH2Q9Y6C5 1203 aa21.75■■□□□ 1.07
SSU72-203ENST00000378725 PNMA6FA0A0J9YX94 578 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 HOXC6P09630 235 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 ADORA2AP29274 412 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 ADD1P35611 737 aaKnown RBP21.74■■□□□ 1.07
SSU72-203ENST00000378725 RGS2P41220 211 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 AMNQ9BXJ7 453 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 ACAD9Q9H845 621 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 TPCN1Q9ULQ1 816 aa21.74■■□□□ 1.07
SSU72-203ENST00000378725 PPP1R11O60927 126 aaPredicted RBP21.73■■□□□ 1.07
SSU72-203ENST00000378725 TAL1P17542 331 aaPredicted RBP21.73■■□□□ 1.07
SSU72-203ENST00000378725 KCTD2Q14681 263 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 RABEP1Q15276 862 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms