RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 KIF5BP33176 963 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 AK2P54819 239 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 FCGRTP55899 365 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 SLC35G1Q2M3R5 365 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 USH1GQ495M9 461 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 COL13A1Q5TAT6 717 aaPredicted RBP13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 NCOA5Q9HCD5 579 aaKnown RBP13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 ZNF536O15090 1300 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 RLFQ13129 1914 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 CYTH3O43739 400 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 PLA2G6O60733 806 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 ALAS1P13196 640 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 OTOP1Q7RTM1 612 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 AGXT2Q9BYV1 514 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 CALM1P0DP23 149 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 CALM2P0DP24 149 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 CALM3P0DP25 149 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 CDC27P30260 824 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 RTN1Q16799 776 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 GPR142Q7Z601 462 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 PIGSQ96S52 555 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
DEPDC4-202ENST00000378244 ZSWIM8A7E2V4 1837 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 PRKCZQ05513 592 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 COA7Q96BR5 231 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 GABRQQ9UN88 632 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 MAPK4P31152 587 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 QRICH1Q2TAL8 776 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 RIOX2Q8IUF8 465 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 TPCN1Q9ULQ1 816 aa13.62□□□□□ -0.23
DEPDC4-202ENST00000378244 ICAM1P05362 532 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 FLT3LGP49771 235 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 FBXL16Q8N461 479 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 FAM217BQ9NTX9 383 aaPredicted RBP13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 PGK2P07205 417 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 FDX1P10109 184 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 CYP2B6P20813 491 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 CTU1Q7Z7A3 348 aaKnown RBP13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 IL17RAQ96F46 866 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
DEPDC4-202ENST00000378244 ATP2A1O14983 1001 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 ARHGEF6Q15052 776 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 TMTC3Q6ZXV5 915 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 MROH8Q9H579 483 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 SRRDQ9UH36 339 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 COL11A1P12107 1806 aaPredicted RBP13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 PARP14Q460N5 1801 aa13.6□□□□□ -0.23
DEPDC4-202ENST00000378244 ZBTB5O15062 677 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 SLC25A27O95847 323 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 GNAQP50148 359 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 OAZ1P54368 228 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 NSMFQ6X4W1 530 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 ANKRD35Q8N283 1001 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 PHKBQ93100 1093 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 NFIBO00712 420 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 LARGE1O95461 756 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 FCER1AP12319 257 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 HOXD10P28358 340 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 ADORA2AP29274 412 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 KCTD2Q14681 263 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 ANKRD1Q15327 319 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 FBXO11Q86XK2 927 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 RAET1EQ8TD07 263 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 RRP36Q96EU6 259 aaKnown RBP13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 DDX11Q96FC9 970 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 PTCH2Q9Y6C5 1203 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 V9GY48 417 aaPredicted RBP13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
DEPDC4-202ENST00000378244 ELNP15502 786 aa13.58□□□□□ -0.23
DEPDC4-202ENST00000378244 PTPREP23469 700 aa13.58□□□□□ -0.23
DEPDC4-202ENST00000378244 EVCP57679 992 aa13.58□□□□□ -0.23
DEPDC4-202ENST00000378244 ME3Q16798 604 aa13.58□□□□□ -0.23
DEPDC4-202ENST00000378244 DPP9Q86TI2 863 aa13.58□□□□□ -0.23
DEPDC4-202ENST00000378244 SHCBP1Q8NEM2 672 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms