RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 CUEDC2Q9H467 287 aa20.46■□□□□ 0.87
TDP2-202ENST00000378198 MAGEF1Q9HAY2 307 aa20.46■□□□□ 0.87
TDP2-202ENST00000378198 KBTBD4Q9NVX7 518 aa20.46■□□□□ 0.87
TDP2-202ENST00000378198 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
TDP2-202ENST00000378198 USP17L3A6NCW0 530 aa20.45■□□□□ 0.86
TDP2-202ENST00000378198 USP17L4A6NCW7 530 aa20.45■□□□□ 0.86
TDP2-202ENST00000378198 USP17L1Q7RTZ2 530 aa20.45■□□□□ 0.86
TDP2-202ENST00000378198 HEATR3Q7Z4Q2 680 aa20.45■□□□□ 0.86
TDP2-202ENST00000378198 MB21D1Q8N884 522 aa20.45■□□□□ 0.86
TDP2-202ENST00000378198 NOC3LQ8WTT2 800 aaKnown RBP20.45■□□□□ 0.86
TDP2-202ENST00000378198 NAPGQ99747 312 aaPredicted RBP20.45■□□□□ 0.86
TDP2-202ENST00000378198 PSMA7O14818 248 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 CYTH3O43739 400 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 TAF3Q5VWG9 929 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 CCDC24Q8N4L8 307 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 GIMAP8Q8ND71 665 aaPredicted RBP20.44■□□□□ 0.86
TDP2-202ENST00000378198 ZNF287Q9HBT7 754 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 BTAF1O14981 1849 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 TRIM49BA6NDI0 452 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 LGALS16A8MUM7 142 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 SASH3O75995 380 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 ARHGAP25P42331 645 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 SLC35G1Q2M3R5 365 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 OR8K1Q8NGG5 319 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 AK8Q96MA6 479 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 ANKIB1Q9P2G1 1089 aa20.44■□□□□ 0.86
TDP2-202ENST00000378198 PP2D1A8MPX8 630 aa20.43■□□□□ 0.86
TDP2-202ENST00000378198 GNPATO15228 680 aa20.43■□□□□ 0.86
TDP2-202ENST00000378198 WHAMMP3Q1A5X7 153 aa20.43■□□□□ 0.86
TDP2-202ENST00000378198 CERS3Q8IU89 383 aa20.43■□□□□ 0.86
TDP2-202ENST00000378198 MSANTD4Q8NCY6 345 aa20.43■□□□□ 0.86
TDP2-202ENST00000378198 HNRNPLLQ8WVV9 542 aaKnown RBP20.43■□□□□ 0.86
TDP2-202ENST00000378198 DHTKD1Q96HY7 919 aaPredicted RBP20.43■□□□□ 0.86
TDP2-202ENST00000378198 MAGEC2Q9UBF1 373 aaPredicted RBP20.43■□□□□ 0.86
TDP2-202ENST00000378198 PUF60Q9UHX1 559 aaKnown RBP20.43■□□□□ 0.86
TDP2-202ENST00000378198 EPN1Q9Y6I3 576 aaPredicted RBP20.43■□□□□ 0.86
TDP2-202ENST00000378198 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
TDP2-202ENST00000378198 KRT25Q7Z3Z0 450 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 ZNF507Q8TCN5 953 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 TGFBRAP1Q8WUH2 860 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 CCDC47Q96A33 483 aaKnown RBP20.42■□□□□ 0.86
TDP2-202ENST00000378198 SLF1Q9BQI6 1058 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 SPZ1Q9BXG8 430 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 FUT8Q9BYC5 575 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 ZMYND12Q9H0C1 365 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 ZSWIM4Q9H7M6 989 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 LUC7L2Q9Y383 392 aaKnown RBP20.42■□□□□ 0.86
TDP2-202ENST00000378198 RTCBQ9Y3I0 505 aaKnown RBP20.42■□□□□ 0.86
TDP2-202ENST00000378198 NDUFA10O95299 355 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 RASA1P20936 1047 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 ZNF804AQ7Z570 1209 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 TRIM47Q96LD4 638 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 DNAJC7Q99615 494 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 CAPN11Q9UMQ6 739 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 TAF1LQ8IZX4 1826 aa20.42■□□□□ 0.86
TDP2-202ENST00000378198 TTC26A0AVF1 554 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 CCDC66A2RUB6 948 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 DNM2P50570 870 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 PMS1P54277 932 aaKnown RBP20.41■□□□□ 0.86
TDP2-202ENST00000378198 PIP4K2BP78356 416 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 GRAPQ13588 217 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 LONRF2Q1L5Z9 754 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 TSR1Q2NL82 804 aaKnown RBP20.41■□□□□ 0.86
TDP2-202ENST00000378198 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
TDP2-202ENST00000378198 ANKZF1Q9H8Y5 726 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 RAB21Q9UL25 225 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 OR52Z1P0C646 297 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 CYP2C19P33261 490 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 PPP1R2P41236 205 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 SMC1AQ14683 1233 aaKnown RBP20.41■□□□□ 0.86
TDP2-202ENST00000378198 DIXDC1Q155Q3 683 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 TTI2Q6NXR4 508 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 C15orf52Q6ZUT6 534 aaKnown RBP20.41■□□□□ 0.86
TDP2-202ENST00000378198 CABP7Q86V35 215 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 CHP1Q99653 195 aa20.41■□□□□ 0.86
TDP2-202ENST00000378198 DDX60LQ5H9U9 1706 aaKnown RBP20.4■□□□□ 0.86
TDP2-202ENST00000378198 ABL1P00519 1130 aa20.4■□□□□ 0.86
TDP2-202ENST00000378198 NONOQ15233 471 aaKnown RBP eCLIP20.4■□□□□ 0.86
TDP2-202ENST00000378198 HAUS4Q9H6D7 363 aa20.4■□□□□ 0.86
TDP2-202ENST00000378198 C6orf50Q9HD87 102 aa20.4■□□□□ 0.86
TDP2-202ENST00000378198 BICDL2A1A5D9 508 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 CTAGE15A4D2H0 777 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 CTAGE8P0CG41 777 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 SMARCA1P28370 1054 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 GNA11P29992 359 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 NAPAP54920 295 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 CTAGE6Q86UF2 777 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 CTAGE4Q8IX94 777 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 SLC44A5Q8NCS7 719 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.86
TDP2-202ENST00000378198 PLIN2Q99541 437 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 NUP58Q9BVL2 599 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 MTMR7Q9Y216 660 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 FLT1P17948 1338 aa20.39■□□□□ 0.86
TDP2-202ENST00000378198 MAP2K7O14733 419 aa20.39■□□□□ 0.85
TDP2-202ENST00000378198 ERLIN1O75477 346 aa20.39■□□□□ 0.85
TDP2-202ENST00000378198 CCNE1P24864 410 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms