RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CCNT1O60563 726 aaKnown RBP22.87■■□□□ 1.25
VSX1-202ENST00000376709 TTLL1O95922 423 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 SPECC1LQ69YQ0 1117 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 CLEC10AQ8IUN9 316 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 CNKSR1Q969H4 720 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 RIOX1Q9H6W3 641 aa22.87■■□□□ 1.25
VSX1-202ENST00000376709 APOBEC3HQ6NTF7 200 aaKnown RBP22.86■■□□□ 1.25
VSX1-202ENST00000376709 REXO1Q8N1G1 1221 aaKnown RBP22.86■■□□□ 1.25
VSX1-202ENST00000376709 ZNF710Q8N1W2 664 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 RMND1Q9NWS8 449 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 PSDA5PKW4 1024 aaPredicted RBP22.86■■□□□ 1.25
VSX1-202ENST00000376709 PP2D1A8MPX8 630 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 PRPHP41219 470 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 RRAGBQ5VZM2 374 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 KIAA0825Q8IV33 1275 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 CTNND2Q9UQB3 1225 aa22.86■■□□□ 1.25
VSX1-202ENST00000376709 MYO3BQ8WXR4 1341 aa22.85■■□□□ 1.25
VSX1-202ENST00000376709 IGKV6D-41A0A0C4DH26 115 aa22.85■■□□□ 1.25
VSX1-202ENST00000376709 hCG_1984214I3L0E3 225 aa22.85■■□□□ 1.25
VSX1-202ENST00000376709 MPHOSPH10O00566 681 aaKnown RBP22.85■■□□□ 1.25
VSX1-202ENST00000376709 CRKP46108 304 aa22.85■■□□□ 1.25
VSX1-202ENST00000376709 NEK8Q86SG6 692 aa22.85■■□□□ 1.25
VSX1-202ENST00000376709 ZNF713Q8N859 430 aaPredicted RBP22.85■■□□□ 1.25
VSX1-202ENST00000376709 SCN9AQ15858 1988 aa22.85■■□□□ 1.25
VSX1-202ENST00000376709 RPN1P04843 607 aaKnown RBP22.84■■□□□ 1.25
VSX1-202ENST00000376709 SHMT1P34896 483 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 GOLGA8FQ08AF8 430 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 GOLGA8DPQ0D2H9 430 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 AOC3Q16853 763 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 C7orf43Q8WVR3 580 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 PPP1R13BQ96KQ4 1090 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 PCDHAC2Q9Y5I4 1007 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 KIF2AO00139 706 aaPredicted RBP22.84■■□□□ 1.25
VSX1-202ENST00000376709 OR52Z1P0C646 297 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 NFIAQ12857 509 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 DACT2Q5SW24 774 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 MAP7D2Q96T17 732 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 GPCPD1Q9NPB8 672 aa22.84■■□□□ 1.25
VSX1-202ENST00000376709 BIN2Q9UBW5 565 aaPredicted RBP22.84■■□□□ 1.25
VSX1-202ENST00000376709 A0A1B0GTH6 734 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 ESYT2A0FGR8 921 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 SNHG28P0DPA3 235 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 NR1I3Q14994 352 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 STRIP1Q5VSL9 837 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 JAKMIP3Q5VZ66 844 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 TBCKQ8TEA7 893 aa22.83■■□□□ 1.25
VSX1-202ENST00000376709 ATP2B2Q01814 1243 aa22.83■■□□□ 1.24
VSX1-202ENST00000376709 TBX2Q13207 712 aaPredicted RBP22.83■■□□□ 1.24
VSX1-202ENST00000376709 ZNF658Q5TYW1 1059 aaPredicted RBP22.83■■□□□ 1.24
VSX1-202ENST00000376709 CDKAL1Q5VV42 579 aa22.83■■□□□ 1.24
VSX1-202ENST00000376709 CTAGE1Q96RT6 745 aa22.83■■□□□ 1.24
VSX1-202ENST00000376709 CCSER1Q9C0I3 900 aa22.83■■□□□ 1.24
VSX1-202ENST00000376709 TMX1Q9H3N1 280 aa22.83■■□□□ 1.24
VSX1-202ENST00000376709 CCP110O43303 1012 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 RBM5P52756 815 aaKnown RBP eCLIP22.82■■□□□ 1.24
VSX1-202ENST00000376709 NAALADL2Q58DX5 795 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 AK8Q96MA6 479 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 ZDHHC15Q96MV8 337 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 PLIN2Q99541 437 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 KIF18AQ8NI77 898 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 COA7Q96BR5 231 aa22.82■■□□□ 1.24
VSX1-202ENST00000376709 MYH4Q9Y623 1939 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 CTIFO43310 598 aaKnown RBP22.81■■□□□ 1.24
VSX1-202ENST00000376709 ADCY7P51828 1080 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 CACNB3P54284 484 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 ZNF543Q08ER8 600 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 PAK1Q13153 545 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 DEFB132Q7Z7B7 95 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 TMEM260Q9NX78 707 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 RWDD2AQ9UIY3 292 aa22.81■■□□□ 1.24
VSX1-202ENST00000376709 MTERF4Q7Z6M4 381 aaKnown RBP22.8■■□□□ 1.24
VSX1-202ENST00000376709 ZFPM1Q8IX07 1006 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 SLURP2P0DP57 97 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 TCP10Q12799 353 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 CCDC96Q2M329 555 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 FILIP1LQ4L180 1135 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 APTXQ7Z2E3 356 aaKnown RBP22.8■■□□□ 1.24
VSX1-202ENST00000376709 CABP7Q86V35 215 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 BAG1Q99933 345 aaPredicted RBP22.8■■□□□ 1.24
VSX1-202ENST00000376709 EHD4Q9H223 541 aa22.8■■□□□ 1.24
VSX1-202ENST00000376709 ZNF646O15015 1829 aaPredicted RBP22.8■■□□□ 1.24
VSX1-202ENST00000376709 C10orf71Q711Q0 1435 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 ARHGAP6O43182 974 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 C21orf2O43822 256 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 COBLO75128 1261 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 MYL1P05976 194 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 ADKP55263 362 aaKnown RBP22.79■■□□□ 1.24
VSX1-202ENST00000376709 FKBP1AP62942 108 aaKnown RBP22.79■■□□□ 1.24
VSX1-202ENST00000376709 NELFBQ8WX92 580 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 ARID3AQ99856 593 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 ORC2Q13416 577 aaPredicted RBP22.79■■□□□ 1.24
VSX1-202ENST00000376709 ADGRF4Q8IZF3 695 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 TC2NQ8N9U0 490 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 ADD3Q9UEY8 706 aaKnown RBP22.79■■□□□ 1.24
VSX1-202ENST00000376709 MAPK8IP1Q9UQF2 711 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 GDAQ9Y2T3 454 aa22.79■■□□□ 1.24
VSX1-202ENST00000376709 PNMA6FA0A0J9YX94 578 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 TEX33O43247 280 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 TECP42680 631 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 PPP4R3BQ5MIZ7 849 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms