RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 LRRD1A4D1F6 860 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 ZSCAN26Q16670 478 aa13.63□□□□□ -0.23
VPS13A-204ENST00000376634 RNF8O76064 485 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 IQCB1Q15051 598 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 SCYL2Q6P3W7 929 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 EP400NLQ6ZTU2 488 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
VPS13A-204ENST00000376634 BRD3Q15059 726 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 GSTA4O15217 222 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 CLTAP09496 248 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 APPBP2Q92624 585 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 CFAP61Q8NHU2 1237 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 FAM47CQ5HY64 1035 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 ANGPTL3Q9Y5C1 460 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 CSADQ9Y600 493 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 MYH3P11055 1940 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 NVLO15381 856 aaKnown RBP13.62□□□□□ -0.23
VPS13A-204ENST00000376634 LRRC8CQ8TDW0 803 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 VPS41P49754 854 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 IL1RL1Q01638 556 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 NELFCDQ8IXH7 590 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 XAGE2Q96GT9 111 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
VPS13A-204ENST00000376634 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
VPS13A-204ENST00000376634 MAD1L1Q9Y6D9 718 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 VGLL3A8MV65 326 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 RLBP1P12271 317 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 PTPREP23469 700 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 IFRD2Q12894 506 aaPredicted RBP13.62□□□□□ -0.23
VPS13A-204ENST00000376634 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS13A-204ENST00000376634 MED4Q9NPJ6 270 aa13.62□□□□□ -0.23
VPS13A-204ENST00000376634 PDE6BP35913 854 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 ESRRGP62508 458 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 PNOCQ13519 176 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TTBK2Q6IQ55 1244 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.61□□□□□ -0.232e-8■■■■■ 39.2
VPS13A-204ENST00000376634 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 HESX1Q9UBX0 185 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 BBOF1Q8ND07 529 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 SUPT20HQ8NEM7 779 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TSC1Q92574 1164 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TEKT2Q9UIF3 430 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 CABP7Q86V35 215 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TMOD1P28289 359 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TMTC3Q6ZXV5 915 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 GDAP1L1Q96MZ0 367 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 LMNB2Q03252 620 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 INHBAP08476 426 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 POLGP54098 1239 aaPredicted RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TTC1Q99614 292 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 CAPS2Q9BXY5 557 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 TESPA1A2RU30 521 aaPredicted RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 GNGT2O14610 69 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 KIF22Q14807 665 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 PLEKHA4Q9H4M7 779 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 DDX25Q9UHL0 483 aaKnown RBP13.61□□□□□ -0.23
VPS13A-204ENST00000376634 ATP1A2P50993 1020 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 RAP1GDS1P52306 607 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
VPS13A-204ENST00000376634 ASPHQ12797 758 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.6□□□□□ -0.23
VPS13A-204ENST00000376634 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
VPS13A-204ENST00000376634 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
VPS13A-204ENST00000376634 KAZNQ674X7 775 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 KRT10P13645 584 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 CTDSPL2Q05D32 466 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
VPS13A-204ENST00000376634 BLZF1Q9H2G9 400 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 STK32BQ9NY57 414 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 SLC13A4Q9UKG4 626 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 TPCN1Q9ULQ1 816 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 SUN1O94901 812 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 RPS6KC1Q96S38 1066 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 SPZ1Q9BXG8 430 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 PYGLP06737 847 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 EFHD1Q9BUP0 239 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 PANK4Q9NVE7 773 aa13.6□□□□□ -0.23
VPS13A-204ENST00000376634 ARMCX3Q9UH62 379 aaPredicted RBP13.6□□□□□ -0.23
VPS13A-204ENST00000376634 FBLN1P23142 703 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms