RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SOCS7O14512 581 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PPP6R2O75170 966 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 SEC31AO94979 1220 aaKnown RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PABPC4Q13310 644 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■□ 25.6
HDAC6-203ENST00000376619 PPP1R13BQ96KQ4 1090 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PPP2R2CQ9Y2T4 447 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 TCHHQ07283 1943 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC6-203ENST00000376619 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 HARSP12081 509 aaKnown RBP12.46□□□□□ -0.41
HDAC6-203ENST00000376619 NEK8Q86SG6 692 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 CSRNP1Q96S65 589 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 FAM107BQ9H098 131 aa12.46□□□□□ -0.41
HDAC6-203ENST00000376619 SRPRBQ9Y5M8 271 aaKnown RBP12.46□□□□□ -0.41
HDAC6-203ENST00000376619 AKR1B1P15121 316 aa12.46□□□□□ -0.42
HDAC6-203ENST00000376619 PLCG1P19174 1290 aa12.46□□□□□ -0.42
HDAC6-203ENST00000376619 ATP2B4P23634 1241 aa12.46□□□□□ -0.42
HDAC6-203ENST00000376619 RRAGAQ7L523 313 aa12.46□□□□□ -0.42
HDAC6-203ENST00000376619 SMCR8Q8TEV9 937 aaPredicted RBP12.46□□□□□ -0.42
HDAC6-203ENST00000376619 KIAA1024Q9UPX6 916 aa12.46□□□□□ -0.42
HDAC6-203ENST00000376619 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.42
HDAC6-203ENST00000376619 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 ICA1Q05084 483 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 PPP2R3AQ06190 1150 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC6-203ENST00000376619 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■■□□ 16.9
HDAC6-203ENST00000376619 CTAGE9A4FU28 777 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 OR52Z1P0C646 297 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 LMAN1P49257 510 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 SLFN13Q68D06 897 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 SGMS1Q86VZ5 419 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 KCNB2Q92953 911 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 SLIT2O94813 1529 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 CXCR5P32302 372 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 ETF1P62495 437 aaKnown RBP12.45□□□□□ -0.42
HDAC6-203ENST00000376619 TOGARAM2Q6ZUX3 1019 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
HDAC6-203ENST00000376619 TMEM110-MUSTN1A8MSY1 372 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
HDAC6-203ENST00000376619 TDP2O95551 362 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-203ENST00000376619 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-203ENST00000376619 ENGASEQ8NFI3 743 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 ARHGAP6O43182 974 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
HDAC6-203ENST00000376619 KIF5AQ12840 1032 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 SEPT2Q15019 361 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 AOC3Q16853 763 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 BUB1O43683 1085 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 FGFR2P21802 821 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 SPAG1Q07617 926 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 ODF2Q5BJF6 829 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 PLA2G4DQ86XP0 818 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 JDP2Q8WYK2 163 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 TMEM60Q9H2L4 133 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 ARFGAP3Q9NP61 516 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 SPTLC3Q9NUV7 552 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 CTAGE15A4D2H0 777 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
HDAC6-203ENST00000376619 CTAGE8P0CG41 777 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 CTAGE6Q86UF2 777 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 CTAGE4Q8IX94 777 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
HDAC6-203ENST00000376619 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-203ENST00000376619 FOXP2O15409 715 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 GRM1Q13255 1194 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 DLGAP5Q15398 846 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 PRAMEF18Q5VWM3 479 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 KRT25Q7Z3Z0 450 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 IFT81Q8WYA0 676 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 DDAH1O94760 285 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 GH2P01242 217 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 FCER1AP12319 257 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 FUCA2Q9BTY2 467 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 GJC1P36383 396 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 TROAPQ12815 778 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 NEK11Q8NG66 645 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 TAF4BQ92750 862 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
HDAC6-203ENST00000376619 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC6-203ENST00000376619 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-203ENST00000376619 ATRNO75882 1429 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 TCRBV5S4A2TA0A5A2 114 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 ERLIN1O75477 346 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms