RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CNNM3Q8NE01 707 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 ARHGEF10LQ9HCE6 1279 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 VWA3AA6NCI4 1184 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 POLR2DO15514 142 aaKnown RBP20.15■□□□□ 0.82
CTTN-203ENST00000376561 ADCY7P51828 1080 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 ARL6IP4Q66PJ3 421 aaKnown RBP20.15■□□□□ 0.82
CTTN-203ENST00000376561 LUZP1Q86V48 1076 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 NUP88Q99567 741 aaPredicted RBP20.15■□□□□ 0.82
CTTN-203ENST00000376561 ANO10Q9NW15 660 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 BIN2Q9UBW5 565 aaPredicted RBP20.15■□□□□ 0.82
CTTN-203ENST00000376561 USP25Q9UHP3 1055 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 A0A087WWV3 80 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 ECE1P42892 770 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
CTTN-203ENST00000376561 BMP3P12645 472 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 CAP2P40123 477 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 C11orf57Q6ZUT1 292 aaPredicted RBP20.14■□□□□ 0.81
CTTN-203ENST00000376561 ELOA2Q8IYF1 753 aaPredicted RBP20.14■□□□□ 0.81
CTTN-203ENST00000376561 EPSTI1Q96J88 318 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 TEPSINQ96N21 525 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 TMX2Q9Y320 296 aa20.14■□□□□ 0.81
CTTN-203ENST00000376561 QRICH1Q2TAL8 776 aa20.13■□□□□ 0.81
CTTN-203ENST00000376561 JAKMIP3Q5VZ66 844 aa20.13■□□□□ 0.81
CTTN-203ENST00000376561 ACER1Q8TDN7 264 aa20.13■□□□□ 0.81
CTTN-203ENST00000376561 SYMPKQ92797 1274 aaKnown RBP20.13■□□□□ 0.81
CTTN-203ENST00000376561 RIC8AQ9NPQ8 531 aa20.13■□□□□ 0.81
CTTN-203ENST00000376561 IL17AQ16552 155 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 KIF4BQ2VIQ3 1234 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 ARHGAP27Q6ZUM4 889 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 PDILTQ8N807 584 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 TMEM260Q9NX78 707 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 ASTN2O75129 1339 aaPredicted RBP20.12■□□□□ 0.81
CTTN-203ENST00000376561 DICER1Q9UPY3 1922 aaKnown RBP20.12■□□□□ 0.81
CTTN-203ENST00000376561 ZRSR1Q15695 479 aaKnown RBP20.12■□□□□ 0.81
CTTN-203ENST00000376561 CDC37Q16543 378 aaPredicted RBP20.12■□□□□ 0.81
CTTN-203ENST00000376561 NEK8Q86SG6 692 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 SPICE1Q8N0Z3 855 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
CTTN-203ENST00000376561 SERTAD1Q9UHV2 236 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 TUBE1Q9UJT0 475 aa20.12■□□□□ 0.81
CTTN-203ENST00000376561 TMEM232C9JQI7 657 aa20.11■□□□□ 0.81
CTTN-203ENST00000376561 PNOCQ13519 176 aa20.11■□□□□ 0.81
CTTN-203ENST00000376561 IKQ13123 557 aaPredicted RBP20.11■□□□□ 0.81
CTTN-203ENST00000376561 LETM2Q2VYF4 491 aa20.11■□□□□ 0.81
CTTN-203ENST00000376561 BTNL9Q6UXG8 535 aa20.11■□□□□ 0.81
CTTN-203ENST00000376561 TRIM44Q96DX7 344 aaPredicted RBP20.11■□□□□ 0.81
CTTN-203ENST00000376561 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
CTTN-203ENST00000376561 GOPCQ9HD26 462 aa20.11■□□□□ 0.81
CTTN-203ENST00000376561 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.11■□□□□ 0.81
CTTN-203ENST00000376561 HOOK1Q9UJC3 728 aaKnown RBP20.11■□□□□ 0.81
CTTN-203ENST00000376561 A0A087X0B3 334 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 LAD1O00515 517 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 ACTN4O43707 911 aaKnown RBP20.1■□□□□ 0.81
CTTN-203ENST00000376561 ASNSP08243 561 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 LMNB1P20700 586 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 MDM2Q00987 491 aaPredicted RBP20.1■□□□□ 0.81
CTTN-203ENST00000376561 IQCB1Q15051 598 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 SYDE2Q5VT97 1194 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 CUL5Q93034 780 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 PHF20L1A8MW92 1017 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 H7C1D1 291 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 BIN1O00499 593 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 CCNT1O60563 726 aaKnown RBP20.1■□□□□ 0.81
CTTN-203ENST00000376561 LONP1P36776 959 aaKnown RBP20.1■□□□□ 0.81
CTTN-203ENST00000376561 CLK2P49760 499 aaKnown RBP20.1■□□□□ 0.81
CTTN-203ENST00000376561 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
CTTN-203ENST00000376561 DPCR1Q3MIW9 517 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 KIAA1755Q5JYT7 1200 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 CEP57L1Q8IYX8 460 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 PCDHA1Q9Y5I3 950 aa20.1■□□□□ 0.81
CTTN-203ENST00000376561 ATAD5Q96QE3 1844 aa20.09■□□□□ 0.81
CTTN-203ENST00000376561 FOXN1O15353 648 aa20.09■□□□□ 0.81
CTTN-203ENST00000376561 NLRP12P59046 1061 aa20.09■□□□□ 0.81
CTTN-203ENST00000376561 KANK3Q6NY19 840 aa20.09■□□□□ 0.81
CTTN-203ENST00000376561 DEFB129Q9H1M3 183 aa20.09■□□□□ 0.81
CTTN-203ENST00000376561 PSTPIP2Q9H939 334 aa20.09■□□□□ 0.81
CTTN-203ENST00000376561 AP5Z1O43299 807 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 ADCY5O95622 1261 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 PLCB2Q00722 1185 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 POSTNQ15063 836 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 UBE2SQ16763 222 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 DTHD1Q6ZMT9 781 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 DHX58Q96C10 678 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 NAT10Q9H0A0 1025 aaKnown RBP20.08■□□□□ 0.81
CTTN-203ENST00000376561 SBF1O95248 1867 aa20.08■□□□□ 0.81
CTTN-203ENST00000376561 PRPHP41219 470 aa20.08■□□□□ 0.8
CTTN-203ENST00000376561 ORC2Q13416 577 aaPredicted RBP20.08■□□□□ 0.8
CTTN-203ENST00000376561 AMNQ9BXJ7 453 aa20.08■□□□□ 0.8
CTTN-203ENST00000376561 SH2D4AQ9H788 454 aa20.08■□□□□ 0.8
CTTN-203ENST00000376561 VCPKMTQ9H867 229 aa20.08■□□□□ 0.8
CTTN-203ENST00000376561 PCDHA5Q9Y5H7 936 aa20.08■□□□□ 0.8
CTTN-203ENST00000376561 NEMFO60524 1076 aa20.07■□□□□ 0.8
CTTN-203ENST00000376561 STAT2P52630 851 aa20.07■□□□□ 0.8
CTTN-203ENST00000376561 SNAP25P60880 206 aa20.07■□□□□ 0.8
CTTN-203ENST00000376561 GPC2Q8N158 579 aa20.07■□□□□ 0.8
CTTN-203ENST00000376561 GLT8D2Q9H1C3 349 aa20.07■□□□□ 0.8
CTTN-203ENST00000376561 GPRC5DQ9NZD1 345 aa20.07■□□□□ 0.8
CTTN-203ENST00000376561 PRR12Q9ULL5 1215 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms