RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CT47A1Q5JQC4 288 aaPredicted RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 TRIML1Q8N9V2 468 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 TMEM87BQ96K49 555 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 RABEP2Q9H5N1 569 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 HDAC6Q9UBN7 1215 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 TRIM10Q9UDY6 481 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 FBXO2Q9UK22 296 aaPredicted RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 SLC12A7Q9Y666 1083 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 RIMBP2O15034 1052 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 USP17L8P0C7I0 530 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 IRAK1P51617 712 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 FAM47AQ5JRC9 791 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 SPATA1Q5VX52 437 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 CNGA4Q8IV77 575 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 GSPT2Q8IYD1 628 aaKnown RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 NUP133Q8WUM0 1156 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 SLF1Q9BQI6 1058 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 DCP1AQ9NPI6 582 aaPredicted RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 SRCAPQ6ZRS2 3230 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 SEMA3EO15041 775 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 ACTN4O43707 911 aaKnown RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 CDC25AP30304 524 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 TOB1P50616 345 aaPredicted RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 SGMS1Q86VZ5 419 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 SH3RF3Q8TEJ3 882 aaPredicted RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 MMS19Q96T76 1030 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 KRT23Q9C075 422 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 MYO1AQ9UBC5 1043 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 BAZ2BQ9UIF8 2168 aaKnown RBP14.49□□□□□ -0.09
MSH5-204ENST00000375755 hCG_1642624A0A1W2PR95 340 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 MYBL2P10244 700 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 WTAPQ15007 396 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 USP49Q70CQ1 688 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 TRAPPC11Q7Z392 1133 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 TMTC1Q8IUR5 882 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 RBM17Q96I25 401 aaKnown RBP14.49□□□□□ -0.09
MSH5-204ENST00000375755 LEMD3Q9Y2U8 911 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 ENC1O14682 589 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 PTPREP23469 700 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 MNAT1P51948 309 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 MAP9Q49MG5 647 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 CDKAL1Q5VV42 579 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 FAM76AQ8TAV0 307 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 SPATA20Q8TB22 786 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 SLC26A6Q9BXS9 759 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 CNNM2Q9H8M5 875 aa14.49□□□□□ -0.09
MSH5-204ENST00000375755 TNKSO95271 1327 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 EBAG9O00559 213 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 TBC1D16Q8TBP0 767 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 CCDC51Q96ER9 411 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 CD209Q9NNX6 404 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 C6orf229H3BNL8 230 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 SRGAP2O75044 1071 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 CDKL5O76039 1030 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 LIFRP42702 1097 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 CUL4BQ13620 913 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 TRIM29Q14134 588 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 ENAHQ8N8S7 591 aaPredicted RBP14.48□□□□□ -0.09
MSH5-204ENST00000375755 MXD3Q9BW11 206 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 ABHD10Q9NUJ1 306 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 KCNG1Q9UIX4 513 aa14.48□□□□□ -0.09
MSH5-204ENST00000375755 LDHBP07195 334 aaKnown RBP14.47□□□□□ -0.09
MSH5-204ENST00000375755 CASP1P29466 404 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 DYNLL2Q96FJ2 89 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 CRACR2AQ9BSW2 395 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 BRIP1Q9BX63 1249 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 GGA1Q9UJY5 639 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 GUCA1BQ9UMX6 200 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 REXO2Q9Y3B8 237 aaKnown RBP14.47□□□□□ -0.09
MSH5-204ENST00000375755 DUOX1Q9NRD9 1551 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 MYH8P13535 1937 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 GOLGA6CA6NDK9 693 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 BTBD18B2RXH4 712 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 COBLO75128 1261 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 MMP10P09238 476 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 GOLGA6DP0CG33 693 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 MAP2K2P36507 400 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
MSH5-204ENST00000375755 SEC23AQ15436 765 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 SMYD4Q8IYR2 804 aaPredicted RBP14.47□□□□□ -0.09
MSH5-204ENST00000375755 ANKRD20A12PQ8NF67 263 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 GOLGA6AQ9NYA3 693 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 IARSP41252 1262 aaKnown RBP14.47□□□□□ -0.09
MSH5-204ENST00000375755 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 ZNF804AQ7Z570 1209 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 SELENOOQ9BVL4 669 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
MSH5-204ENST00000375755 GRIN2DO15399 1336 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 ATP1A1P05023 1023 aaKnown RBP14.46□□□□□ -0.09
MSH5-204ENST00000375755 CYP26C1Q6V0L0 522 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 BCAS4Q8TDM0 211 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 CAPZA3Q96KX2 299 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 UBAC1Q9BSL1 405 aa14.46□□□□□ -0.09
MSH5-204ENST00000375755 SAP30BPQ9UHR5 308 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms