RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 MMP10P09238 476 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
MSH5-203ENST00000375750 USP5P45974 858 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 KCNJ12Q14500 433 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 GSPT2Q8IYD1 628 aaKnown RBP17.09■□□□□ 0.33
MSH5-203ENST00000375750 CACNA1SQ13698 1873 aa17.08■□□□□ 0.33
MSH5-203ENST00000375750 PMS1P54277 932 aaKnown RBP17.08■□□□□ 0.33
MSH5-203ENST00000375750 UBXN1Q04323 297 aa17.08■□□□□ 0.33
MSH5-203ENST00000375750 E2F4Q16254 413 aa17.08■□□□□ 0.33
MSH5-203ENST00000375750 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.08■□□□□ 0.33
MSH5-203ENST00000375750 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.33
MSH5-203ENST00000375750 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.33
MSH5-203ENST00000375750 POLLQ9UGP5 575 aa17.08■□□□□ 0.33
MSH5-203ENST00000375750 MYO6Q9UM54 1294 aa17.08■□□□□ 0.33
MSH5-203ENST00000375750 MYH6P13533 1939 aa17.08■□□□□ 0.32
MSH5-203ENST00000375750 MYO1CO00159 1063 aa17.08■□□□□ 0.32
MSH5-203ENST00000375750 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
MSH5-203ENST00000375750 ACTN2P35609 894 aa17.08■□□□□ 0.32
MSH5-203ENST00000375750 IFIT1BQ5T764 474 aaKnown RBP17.08■□□□□ 0.32
MSH5-203ENST00000375750 RIN2Q8WYP3 895 aaPredicted RBP17.08■□□□□ 0.32
MSH5-203ENST00000375750 ZSCAN10Q96SZ4 725 aaPredicted RBP17.08■□□□□ 0.32
MSH5-203ENST00000375750 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
MSH5-203ENST00000375750 MYH2Q9UKX2 1941 aa17.08■□□□□ 0.32
MSH5-203ENST00000375750 PP2D1A8MPX8 630 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 PRCPP42785 496 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
MSH5-203ENST00000375750 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
MSH5-203ENST00000375750 GRIK5Q16478 980 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 FAM47AQ5JRC9 791 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 TMTC1Q8IUR5 882 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 LIMA1Q9UHB6 759 aaKnown RBP17.07■□□□□ 0.32
MSH5-203ENST00000375750 GGA1Q9UJY5 639 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 TTC26A0AVF1 554 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 AMPD2Q01433 879 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
MSH5-203ENST00000375750 GOLGA5Q8TBA6 731 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 ESR2Q92731 530 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 MMS19Q96T76 1030 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 BRIP1Q9BX63 1249 aa17.07■□□□□ 0.32
MSH5-203ENST00000375750 PDS5AQ29RF7 1337 aaKnown RBP17.07■□□□□ 0.32
MSH5-203ENST00000375750 ATP1A1P05023 1023 aaKnown RBP17.06■□□□□ 0.32
MSH5-203ENST00000375750 PAK1Q13153 545 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 CYP26C1Q6V0L0 522 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 IRF2BP1Q8IU81 584 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 CRAMP1Q96RY5 1269 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 PRPF3O43395 683 aaKnown RBP17.06■□□□□ 0.32
MSH5-203ENST00000375750 ERLIN1O75477 346 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 KLK7P49862 253 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 EPN1Q9Y6I3 576 aaPredicted RBP17.06■□□□□ 0.32
MSH5-203ENST00000375750 XBP1P17861 261 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 ATP2B4P23634 1241 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 MRPS25P82663 173 aaKnown RBP17.06■□□□□ 0.32
MSH5-203ENST00000375750 TBC1D16Q8TBP0 767 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 FERMT2Q96AC1 680 aa17.06■□□□□ 0.32
MSH5-203ENST00000375750 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
MSH5-203ENST00000375750 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 ZNF185O15231 689 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 SRGNP10124 158 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 ATP2C1P98194 919 aaPredicted RBP17.05■□□□□ 0.32
MSH5-203ENST00000375750 TROAPQ12815 778 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 CATIPQ7Z7H3 387 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
MSH5-203ENST00000375750 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 RRP15Q9Y3B9 282 aaKnown RBP17.05■□□□□ 0.32
MSH5-203ENST00000375750 DUSP10Q9Y6W6 482 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 RCCD1A6NED2 376 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
MSH5-203ENST00000375750 NKRFO15226 690 aaKnown RBP eCLIP17.05■□□□□ 0.32
MSH5-203ENST00000375750 NDUFA10O95299 355 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 FECHP22830 423 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 TNNT3P45378 269 aaPredicted RBP17.05■□□□□ 0.32
MSH5-203ENST00000375750 HERVK_113P62684 666 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 IQUBQ8NA54 791 aa17.05■□□□□ 0.32
MSH5-203ENST00000375750 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
MSH5-203ENST00000375750 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
MSH5-203ENST00000375750 NLRP5P59047 1200 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 PSD3Q9NYI0 1048 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 RWDD2AQ9UIY3 292 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
MSH5-203ENST00000375750 DIXDC1Q155Q3 683 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 WHAMMP3Q1A5X7 153 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 SRLQ86TD4 932 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 GPKOWQ92917 476 aaPredicted RBP eCLIP17.04■□□□□ 0.324e-8■■■■□ 19.5
MSH5-203ENST00000375750 FAM204AQ9H8W3 233 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
MSH5-203ENST00000375750 TIAM2Q8IVF5 1701 aa17.03■□□□□ 0.32
MSH5-203ENST00000375750 MYH13Q9UKX3 1938 aa17.03■□□□□ 0.32
MSH5-203ENST00000375750 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
MSH5-203ENST00000375750 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
MSH5-203ENST00000375750 CYP2D6P10635 497 aa17.03■□□□□ 0.32
MSH5-203ENST00000375750 WDR59Q6PJI9 974 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms