RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PDE6BP35913 854 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 KLHL10Q6JEL2 608 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 MTRQ99707 1265 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 UBA5Q9GZZ9 404 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 ZMYND12Q9H0C1 365 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 TMEM60Q9H2L4 133 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 TRIM66O15016 1216 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 ZRANB2O95218 330 aaKnown RBP eCLIP15.79■□□□□ 0.12
MSH5-202ENST00000375740 NAPAP54920 295 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 STX17P56962 302 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 GABPAQ06546 454 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 CT47A1Q5JQC4 288 aaPredicted RBP15.79■□□□□ 0.12
MSH5-202ENST00000375740 SMYD4Q8IYR2 804 aaPredicted RBP15.79■□□□□ 0.12
MSH5-202ENST00000375740 RRP36Q96EU6 259 aaKnown RBP15.79■□□□□ 0.12
MSH5-202ENST00000375740 PYM1Q9BRP8 204 aaKnown RBP15.79■□□□□ 0.12
MSH5-202ENST00000375740 PPP1R3GB7ZBB8 358 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 G3V3G9 751 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 AKR1B1P15121 316 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 CUL4BQ13620 913 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 DTHD1Q6ZMT9 781 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 PPP1R13BQ96KQ4 1090 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 PIGSQ96S52 555 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 PARP3Q9Y6F1 533 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 NRXN2Q9P2S2 1712 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 SMCO2A6NFE2 343 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 SMARCA1P28370 1054 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 GOLGA8FQ08AF8 430 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 GOLGA8DPQ0D2H9 430 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 SPATA1Q5VX52 437 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 MTMR4Q9NYA4 1195 aa15.78■□□□□ 0.12
MSH5-202ENST00000375740 NRDCO43847 1150 aa15.77■□□□□ 0.12
MSH5-202ENST00000375740 FAM193AP78312 1265 aa15.77■□□□□ 0.12
MSH5-202ENST00000375740 FAM177A1Q8N128 213 aaPredicted RBP15.77■□□□□ 0.12
MSH5-202ENST00000375740 MASTLQ96GX5 879 aa15.77■□□□□ 0.12
MSH5-202ENST00000375740 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.77■□□□□ 0.125e-8■■□□□ 12.7
MSH5-202ENST00000375740 FRMPD2Q68DX3 1309 aaPredicted RBP15.77■□□□□ 0.11
MSH5-202ENST00000375740 FANCGO15287 622 aa15.77■□□□□ 0.11
MSH5-202ENST00000375740 GTPBP6O43824 516 aaPredicted RBP15.77■□□□□ 0.11
MSH5-202ENST00000375740 GYS2P54840 703 aa15.77■□□□□ 0.11
MSH5-202ENST00000375740 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.11
MSH5-202ENST00000375740 CCDC12Q8WUD4 166 aaPredicted RBP15.77■□□□□ 0.11
MSH5-202ENST00000375740 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.119e-12■□□□□ 10.4
MSH5-202ENST00000375740 TMX4Q9H1E5 349 aaPredicted RBP15.77■□□□□ 0.11
MSH5-202ENST00000375740 C6orf50Q9HD87 102 aa15.77■□□□□ 0.11
MSH5-202ENST00000375740 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.11
MSH5-202ENST00000375740 PP2D1A8MPX8 630 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 SASH3O75995 380 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 PDHBP11177 359 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 TXLNAP40222 546 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 EIF6P56537 245 aaKnown RBP15.76■□□□□ 0.11
MSH5-202ENST00000375740 MSL1Q68DK7 614 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 CDC42EP5Q6NZY7 148 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 KCNQ5Q9NR82 932 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
MSH5-202ENST00000375740 NR1I3Q14994 352 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 SOGA3Q5TF21 947 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 CLEC10AQ8IUN9 316 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 LRRC47Q8N1G4 583 aaKnown RBP15.76■□□□□ 0.11
MSH5-202ENST00000375740 RIOX1Q9H6W3 641 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 RSPH14Q9UHP6 348 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 SERPINB13Q9UIV8 391 aa15.76■□□□□ 0.11
MSH5-202ENST00000375740 SYNRGQ9UMZ2 1314 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 IGKV6D-41A0A0C4DH26 115 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 PSDA5PKW4 1024 aaPredicted RBP15.75■□□□□ 0.11
MSH5-202ENST00000375740 GNA11P29992 359 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 STAT6P42226 847 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 KCNJ6P48051 423 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 KRT25Q7Z3Z0 450 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 FLAD1Q8NFF5 587 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 PLIN4Q96Q06 1357 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 NONOQ15233 471 aaKnown RBP eCLIP15.75■□□□□ 0.11
MSH5-202ENST00000375740 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 APOBEC3HQ6NTF7 200 aaKnown RBP15.75■□□□□ 0.11
MSH5-202ENST00000375740 HHIPL2Q6UWX4 724 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
MSH5-202ENST00000375740 DBNDD1Q9H9R9 158 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 QSER1Q2KHR3 1735 aa15.75■□□□□ 0.11
MSH5-202ENST00000375740 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
MSH5-202ENST00000375740 COBLO75128 1261 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 LETM2Q2VYF4 491 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 SPECC1LQ69YQ0 1117 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 C10orf67Q8IYJ2 551 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 TEKT1Q969V4 418 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 DISC1Q9NRI5 854 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 ADAMTSL1Q8N6G6 1762 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 LAD1O00515 517 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 CCNT1O60563 726 aaKnown RBP15.74■□□□□ 0.11
MSH5-202ENST00000375740 UBA7P41226 1012 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 TMCO3Q6UWJ1 677 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 APTXQ7Z2E3 356 aaKnown RBP15.74■□□□□ 0.11
MSH5-202ENST00000375740 PLIN2Q99541 437 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 GPCPD1Q9NPB8 672 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
MSH5-202ENST00000375740 SWAP70Q9UH65 585 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 CTNND2Q9UQB3 1225 aa15.74■□□□□ 0.11
MSH5-202ENST00000375740 MYH8P13535 1937 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms