RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RCAN1P53805 252 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 TUBB4BP68371 445 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 EVX2Q03828 476 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 PRR5LQ6MZQ0 368 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 CATIPQ7Z7H3 387 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 IRF2BP1Q8IU81 584 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 CAPZA3Q96KX2 299 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 GBP3Q9H0R5 595 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 MYO1AQ9UBC5 1043 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 TIAM2Q8IVF5 1701 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 SERPINB2P05120 415 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 IGHMBP2P38935 993 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 MSL3Q8N5Y2 521 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 FAM71BQ8TC56 605 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 EEF2KMTQ96G04 330 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 CAMKK2Q96RR4 588 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 HINFPQ9BQA5 517 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 RTL9Q8NET4 1388 aa15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 TNNT3P45378 269 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 TROAPQ12815 778 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 LRRC31Q6UY01 552 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 TRAPPC11Q7Z392 1133 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 CCDC148Q8NFR7 591 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 RIN2Q8WYP3 895 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 GTPBP6O43824 516 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 PARP1P09874 1014 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 PMS1P54277 932 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 HERVK_113P62684 666 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 DYNLL1P63167 89 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 CHRNDQ07001 517 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 ZNF658Q5TYW1 1059 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 ANKRD20A12PQ8NF67 263 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 BRMS1Q9HCU9 246 aa15.86■□□□□ 0.13
CLCNKA-202ENST00000375692 NMT2O60551 498 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 SYF2O95926 243 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 BMP15O95972 392 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 USP14P54578 494 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 SPAG1Q07617 926 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 RNF40O75150 1001 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 IVLP07476 585 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 CCDC122Q5T0U0 273 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 WDR59Q6PJI9 974 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 GSPT2Q8IYD1 628 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 OR8K1Q8NGG5 319 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 PDGFDQ9GZP0 370 aaPredicted RBP15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 MYH2Q9UKX2 1941 aa15.85■□□□□ 0.13
CLCNKA-202ENST00000375692 NLRP5P59047 1200 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 MB21D1Q8N884 522 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 PLIN2Q99541 437 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 LUC7L2Q9Y383 392 aaKnown RBP15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 PSMD14O00487 310 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 ZNF185O15231 689 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 TRIM14Q14142 442 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 PPP2R5BQ15173 497 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 SAR1BQ9Y6B6 198 aa15.84■□□□□ 0.13
CLCNKA-202ENST00000375692 RCCD1A6NED2 376 aa15.83■□□□□ 0.13
CLCNKA-202ENST00000375692 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.13
CLCNKA-202ENST00000375692 ANAPC4Q9UJX5 808 aa15.83■□□□□ 0.13
CLCNKA-202ENST00000375692 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.13
CLCNKA-202ENST00000375692 PP2D1A8MPX8 630 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 RPS6KA5O75582 802 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 PLCD3Q8N3E9 789 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 LACRTQ9GZZ8 138 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 HAUS4Q9H6D7 363 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 MED4Q9NPJ6 270 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 GNL3LQ9NVN8 582 aaKnown RBP15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 MINPP1Q9UNW1 487 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 DOCK2Q92608 1830 aa15.83■□□□□ 0.12
CLCNKA-202ENST00000375692 TUBBP07437 444 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 MYBL2P10244 700 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 GYG1P46976 350 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 KLK7P49862 253 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 ACBD3Q9H3P7 528 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 AGPAT5Q9NUQ2 364 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 HPCAL4Q9UM19 191 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 CNTNAP5Q8WYK1 1306 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 H7C1D1 291 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 STAT6P42226 847 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 ADSSL1Q8N142 457 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 DNAJC7Q99615 494 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 RBM28Q9NW13 759 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 BSDC1Q9NW68 430 aaPredicted RBP15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 LGALS16A8MUM7 142 aa15.82■□□□□ 0.12
CLCNKA-202ENST00000375692 PDE2AO00408 941 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms