RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 LENG1Q96BZ8 264 aaPredicted RBP14.45□□□□□ -0.1
LSM2-208ENST00000375661 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.45□□□□□ -0.1
LSM2-208ENST00000375661 UPF3AQ9H1J1 476 aaKnown RBP14.45□□□□□ -0.1
LSM2-208ENST00000375661 ABHD16BQ9H3Z7 469 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 FBXO40Q9UH90 709 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 ZHX1Q9UKY1 873 aaPredicted RBP14.45□□□□□ -0.1
LSM2-208ENST00000375661 SYNPO2Q9UMS6 1093 aa14.45□□□□□ -0.1
LSM2-208ENST00000375661 CDH23Q9H251 3354 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 SMIM22K7EJ46 135 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 ZFYP08048 801 aaPredicted RBP14.44□□□□□ -0.1
LSM2-208ENST00000375661 SDSP20132 328 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 OAZ1P54368 228 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 GJA9P57773 515 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 NKX3-2P78367 333 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 ACVR2BQ13705 512 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 RASIP1Q5U651 963 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 GIMAP6Q6P9H5 292 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 TMEM199Q8N511 208 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 GAS2L1Q99501 681 aaPredicted RBP14.44□□□□□ -0.1
LSM2-208ENST00000375661 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.44□□□□□ -0.1
LSM2-208ENST00000375661 PUS7LQ9H0K6 701 aaKnown RBP14.44□□□□□ -0.1
LSM2-208ENST00000375661 RIPK3Q9Y572 518 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 GTF3C3Q9Y5Q9 886 aa14.44□□□□□ -0.1
LSM2-208ENST00000375661 PRUNE2Q8WUY3 3088 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 F5H6K3 240 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 ARVCFO00192 962 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 TNFRSF10AO00220 468 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 TLR3O15455 904 aaKnown RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 ZBED4O75132 1171 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 ASGR1P07306 291 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 C6orf222P0C671 652 aaPredicted RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 FDX1P10109 184 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 KLRC3Q07444 240 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 TMEM240Q5SV17 173 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 PSRC1Q6PGN9 363 aaPredicted RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 CHST13Q8NET6 341 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 ATXN2LQ8WWM7 1075 aaKnown RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 APPBP2Q92624 585 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 MKNK2Q9HBH9 465 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 ZNF287Q9HBT7 754 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 CTDP1Q9Y5B0 961 aaPredicted RBP14.43□□□□□ -0.1
LSM2-208ENST00000375661 VCANP13611 3396 aa14.43□□□□□ -0.1
LSM2-208ENST00000375661 NDUFB10O96000 172 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 RASA1P20936 1047 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 ZMYM1Q5SVZ6 1142 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 TICAM2Q86XR7 235 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 USP38Q8NB14 1042 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 MKL1Q969V6 931 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 SEC62Q99442 399 aaKnown RBP14.42□□□□□ -0.1
LSM2-208ENST00000375661 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 PBX4Q9BYU1 374 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 MTIF3Q9H2K0 278 aaKnown RBP14.42□□□□□ -0.1
LSM2-208ENST00000375661 SLC38A10Q9HBR0 1119 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 FEM1BQ9UK73 627 aa14.42□□□□□ -0.1
LSM2-208ENST00000375661 SPTBN5Q9NRC6 3674 aaKnown RBP14.42□□□□□ -0.1
LSM2-208ENST00000375661 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 IGKV6D-41A0A0C4DH26 115 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 RAB30Q15771 203 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 LRRFIP1Q32MZ4 808 aaKnown RBP14.41□□□□□ -0.1
LSM2-208ENST00000375661 CCDC144BQ3MJ40 725 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 GNASQ5JWF2 1037 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 CCDC129Q6ZRS4 1044 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 C16orf59Q7L2K0 433 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 FAM126BQ8IXS8 530 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 CPXCR1Q8N123 301 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 ANKRD35Q8N283 1001 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 VTI1AQ96AJ9 217 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 STRBPQ96SI9 672 aaKnown RBP14.41□□□□□ -0.1
LSM2-208ENST00000375661 NUP88Q99567 741 aaPredicted RBP14.41□□□□□ -0.1
LSM2-208ENST00000375661 LRRC37A2A6NM11 1700 aa14.41□□□□□ -0.1
LSM2-208ENST00000375661 GSG1L2A8MUP6 293 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 M0R2C6 588 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 CABYRO75952 493 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 CD4P01730 458 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 CSF2RAP15509 400 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 ARMCX2Q7L311 632 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 GMCL1P1Q8NEA9 526 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 HERVK_113Q902F9 699 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 KIFC2Q96AC6 838 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 FGD4Q96M96 766 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 IL23AQ9NPF7 189 aa14.4□□□□□ -0.1
LSM2-208ENST00000375661 A0A0D9SFI3 127 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 ADCY6O43306 1168 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 GNAT2P19087 354 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 NMIQ13287 307 aaPredicted RBP14.39□□□□□ -0.11
LSM2-208ENST00000375661 BMP2KLQ5H9B9 411 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 ZNF365Q70YC5 407 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 ZNF444Q8N0Y2 327 aaPredicted RBP14.39□□□□□ -0.11
LSM2-208ENST00000375661 SLC43A3Q8NBI5 491 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 KATNBL1Q9H079 304 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 RAVER2Q9HCJ3 691 aaKnown RBP14.39□□□□□ -0.11
LSM2-208ENST00000375661 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 CLIP2Q9UDT6 1046 aa14.39□□□□□ -0.11
LSM2-208ENST00000375661 MSRAQ9UJ68 235 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms