RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HNRNPLLQ8WVV9 542 aaKnown RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CCT6BQ92526 530 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 ITGB1BP2Q9UKP3 347 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 PFDN6O15212 129 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CIAO1O76071 339 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 LIG3P49916 1009 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 TTC25Q96NG3 672 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 KRT3P12035 628 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 ELOA2Q8IYF1 753 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 KLHL29Q96CT2 875 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 RFX1P22670 979 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 POLR2BP30876 1174 aaKnown RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CCT5P48643 541 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 ARID5AQ03989 594 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CCNT1O60563 726 aaKnown RBP11.15□□□□□ -0.62
PTCH1-204ENST00000375290 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-204ENST00000375290 PROM2Q8N271 834 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 ADCY7P51828 1080 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 IP6K1Q92551 441 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 TSC22D3Q99576 134 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
PTCH1-204ENST00000375290 CDC42BPBQ9Y5S2 1711 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 SLFN14P0C7P3 912 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 A2ML1A8K2U0 1454 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 CREB3O43889 395 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 COG7P83436 770 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 TEDDM1Q5T9Z0 273 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 FBXO38Q6PIJ6 1188 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 GAS2L3Q86XJ1 694 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 TBC1D22AQ8WUA7 517 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 GUCY2CP25092 1073 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 SLC20A2Q08357 652 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 RAD51AP2Q09MP3 1159 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 HADHQ16836 314 aaKnown RBP11.15□□□□□ -0.62
PTCH1-204ENST00000375290 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-204ENST00000375290 N4BP2L2Q92802 583 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-204ENST00000375290 FMO2Q99518 471 aa11.15□□□□□ -0.62
PTCH1-204ENST00000375290 MAPK13O15264 365 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 MAP3K7O43318 606 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 TMEM60Q9H2L4 133 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 STK36Q9NRP7 1315 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 EXOC5O00471 708 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 HSP90AA4PQ58FG1 418 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 PARD6BQ9BYG5 372 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 ATP8A2Q9NTI2 1148 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.63
PTCH1-204ENST00000375290 MCM9Q9NXL9 1143 aa11.15□□□□□ -0.63
PTCH1-204ENST00000375290 CLTAP09496 248 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 H2AFZP0C0S5 128 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 BRD2P25440 801 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 H2AFVQ71UI9 128 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 KRT12Q99456 494 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 EDEM3Q9BZQ6 932 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 TCP11Q8WWU5 503 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 EPSTI1Q96J88 318 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 FKBP3Q00688 224 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 KIFC3Q9BVG8 833 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 LSG1Q9H089 658 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 SETBP1Q9Y6X0 1596 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 CTIFO43310 598 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 HOOK2Q96ED9 719 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 UBE4BO95155 1302 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 CTNND1O60716 968 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 OPHN1O60890 802 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 COPB1P53618 953 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 MAN2A1Q16706 1144 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 TCEANC2Q96MN5 208 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 COPRSQ9NQ92 184 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 TBC1D8O95759 1140 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 GARSP41250 739 aaKnown RBP11.14□□□□□ -0.63
PTCH1-204ENST00000375290 IFT88Q13099 833 aa11.14□□□□□ -0.63
PTCH1-204ENST00000375290 ADKP55263 362 aaKnown RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 RRAGAQ7L523 313 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 USP28Q96RU2 1077 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 ZNF277Q9NRM2 450 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-204ENST00000375290 SERPINB4P48594 390 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 CCDC13Q8IYE1 715 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 UGGT1Q9NYU2 1555 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 GGPS1O95749 300 aa11.13□□□□□ -0.63
PTCH1-204ENST00000375290 LDHBP07195 334 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms