RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 DMPKQ09013 629 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 BNIP1Q12981 228 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 G3BP1Q13283 466 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBR4-201ENST00000375218 RASA2Q15283 850 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 TUBB8Q3ZCM7 444 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 VPS37DQ86XT2 251 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 SRRTQ9BXP5 876 aaKnown RBP10.16□□□□□ -0.78
UBR4-201ENST00000375218 PLCB1Q9NQ66 1216 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 SEPT3Q9UH03 358 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 CD2APQ9Y5K6 639 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 KRT13P13646 458 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 CCDC91Q7Z6B0 441 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 FAM167BQ9BTA0 163 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 TNMDQ9H2S6 317 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 GUCA1CO95843 209 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 HOXC9P31274 260 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 HIC1Q14526 733 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 FILIP1LQ4L180 1135 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 ZNF594Q96JF6 807 aaPredicted RBP10.15□□□□□ -0.78
UBR4-201ENST00000375218 SH3GL1Q99961 368 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 BLOC1S4Q9NUP1 217 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 LAMB4A4D0S4 1761 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.78
UBR4-201ENST00000375218 CACNB2Q08289 660 aaPredicted RBP10.15□□□□□ -0.78
UBR4-201ENST00000375218 TRDNQ13061 729 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 ANKRD1Q15327 319 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 HNRNPLLQ8WVV9 542 aaKnown RBP10.15□□□□□ -0.78
UBR4-201ENST00000375218 CRBNQ96SW2 442 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 DMTF1Q9Y222 760 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
UBR4-201ENST00000375218 IRS4O14654 1257 aaPredicted RBP10.15□□□□□ -0.79
UBR4-201ENST00000375218 FOXD2O60548 495 aaPredicted RBP10.15□□□□□ -0.79
UBR4-201ENST00000375218 GRK2P25098 689 aa10.15□□□□□ -0.79
UBR4-201ENST00000375218 GUCY2FP51841 1108 aa10.15□□□□□ -0.79
UBR4-201ENST00000375218 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.79
UBR4-201ENST00000375218 RBM18Q96H35 190 aaKnown RBP10.15□□□□□ -0.79
UBR4-201ENST00000375218 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.79
UBR4-201ENST00000375218 RTFDC1Q9BY42 306 aaPredicted RBP10.15□□□□□ -0.79
UBR4-201ENST00000375218 ARFGEF2Q9Y6D5 1785 aa10.15□□□□□ -0.79
UBR4-201ENST00000375218 HADHAP40939 763 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 SKIV2L2P42285 1042 aaKnown RBP10.14□□□□□ -0.79
UBR4-201ENST00000375218 GPS2Q13227 327 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 SERINC3Q13530 473 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 SYCP1Q15431 976 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 C8orf58Q8NAV2 365 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 PLPP7Q8NBV4 271 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 RASSF8Q8NHQ8 419 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 KATNAL1Q9BW62 490 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 RCAN3Q9UKA8 241 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 PCDHB15Q9Y5E8 787 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 ABCC6O95255 1503 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 GPR37L1O60883 481 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 DESP17661 470 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 ATF4P18848 351 aaPredicted RBP10.14□□□□□ -0.79
UBR4-201ENST00000375218 POLR2BP30876 1174 aaKnown RBP10.14□□□□□ -0.79
UBR4-201ENST00000375218 SLC45A4Q5BKX6 768 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 TPH2Q8IWU9 490 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 PEX5LQ8IYB4 626 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 FAM9CQ8IZT9 166 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 PRIMPOLQ96LW4 560 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 NUDT16L1Q9BRJ7 211 aaKnown RBP10.14□□□□□ -0.79
UBR4-201ENST00000375218 CRACR2AQ9BSW2 395 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 PAHP00439 452 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 NFKB2Q00653 900 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 CCDC152Q4G0S7 254 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 ATP13A4Q4VNC1 1196 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 NCAPG2Q86XI2 1143 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 ANKLE2Q86XL3 938 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 FRAT1Q92837 279 aaPredicted RBP10.14□□□□□ -0.79
UBR4-201ENST00000375218 MAK16Q9BXY0 300 aaKnown RBP10.14□□□□□ -0.79
UBR4-201ENST00000375218 ANGPTL3Q9Y5C1 460 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 KCPQ6ZWJ8 1503 aa10.14□□□□□ -0.79
UBR4-201ENST00000375218 SBNO1A3KN83 1393 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 CYP11B2P19099 503 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 TPP2P29144 1249 aaPredicted RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 PRKAR2BP31323 418 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 AP2B1P63010 937 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 NUCB2P80303 420 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 MTHFSDQ2M296 383 aaKnown RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 CCDC30Q5VVM6 783 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 ANKS3Q6ZW76 656 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 TRIM7Q9C029 511 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 ATP8A2Q9NTI2 1148 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 PARP1P09874 1014 aaKnown RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 ALDH1B1P30837 517 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 TPD52P55327 224 aaPredicted RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 KRT222Q8N1A0 295 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 PPM1NQ8N819 430 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 TEX13BQ9BXU2 312 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 RREB1Q92766 1687 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 TBCAO75347 108 aaKnown RBP10.13□□□□□ -0.79
UBR4-201ENST00000375218 RASGRP1O95267 797 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
UBR4-201ENST00000375218 BRINP3Q76B58 766 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms