RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 USH1GQ495M9 461 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 NSUN7Q8NE18 718 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 AGBL1Q96MI9 1066 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 PARK7Q99497 189 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 SLC38A10Q9HBR0 1119 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 RNF186Q9NXI6 227 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 ADAMTS5Q9UNA0 930 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 BAZ2BQ9UIF8 2168 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 ZBTB5O15062 677 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 PPP1R11O60927 126 aaPredicted RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 HSP90AA1P07900 732 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 FDPSP14324 419 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 SMARCA1P28370 1054 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 AKAP17AQ02040 695 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 LBX2Q6XYB7 198 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 COA7Q96BR5 231 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 AIFM3Q96NN9 605 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 RANBP17Q9H2T7 1088 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 ZFYVE28Q9HCC9 887 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 HOMER2Q9NSB8 354 aa10.47□□□□□ -0.73
VSIG4-201ENST00000374737 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
VSIG4-201ENST00000374737 ZNF536O15090 1300 aa10.46□□□□□ -0.73
VSIG4-201ENST00000374737 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 PRPF3O43395 683 aaKnown RBP10.46□□□□□ -0.74
VSIG4-201ENST00000374737 CA12O43570 354 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 TLR2O60603 784 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 CNMDO75829 334 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 CDKL5O76039 1030 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 FMNL1O95466 1100 aaPredicted RBP10.46□□□□□ -0.74
VSIG4-201ENST00000374737 FOSBP53539 338 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 CUL4AQ13619 759 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 HEATR3Q7Z4Q2 680 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 TRIM22Q8IYM9 498 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 REPS2Q8NFH8 660 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 ORC3Q9UBD5 711 aaPredicted RBP10.46□□□□□ -0.74
VSIG4-201ENST00000374737 TSKSQ9UJT2 592 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 RIPK3Q9Y572 518 aa10.46□□□□□ -0.74
VSIG4-201ENST00000374737 MYPNQ86TC9 1320 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 ALDH1A1P00352 501 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 ALAS1P13196 640 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 STAT3P40763 770 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 BECN1Q14457 450 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 PKN1Q16512 942 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
VSIG4-201ENST00000374737 FBXO11Q86XK2 927 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 MTMR8Q96EF0 704 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 RNF26Q9BY78 433 aaPredicted RBP10.45□□□□□ -0.74
VSIG4-201ENST00000374737 ZCCHC17Q9NP64 241 aaKnown RBP10.45□□□□□ -0.74
VSIG4-201ENST00000374737 GJB4Q9NTQ9 266 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 ZNF214Q9UL59 606 aaPredicted RBP10.45□□□□□ -0.74
VSIG4-201ENST00000374737 CCPG1Q9ULG6 757 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 RABGAP1Q9Y3P9 1069 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 PCDHA1Q9Y5I3 950 aa10.45□□□□□ -0.74
VSIG4-201ENST00000374737 ICAM1P05362 532 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 GJB2P29033 226 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 GCLCP48506 637 aaPredicted RBP10.44□□□□□ -0.74
VSIG4-201ENST00000374737 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 ERVK-24P63145 666 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 PFKFB3Q16875 520 aaPredicted RBP10.44□□□□□ -0.74
VSIG4-201ENST00000374737 WDR78Q5VTH9 848 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 NCAPG2Q86XI2 1143 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 GPRC5AQ8NFJ5 357 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 SMARCC2Q8TAQ2 1214 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 LLPHQ9BRT6 129 aaKnown RBP10.44□□□□□ -0.74
VSIG4-201ENST00000374737 AMNQ9BXJ7 453 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 SPATC1LQ9H0A9 340 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 SMC3Q9UQE7 1217 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.44□□□□□ -0.74
VSIG4-201ENST00000374737 RLFQ13129 1914 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 DEXIO95424 95 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 FDX1P10109 184 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 SCG2P13521 617 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
VSIG4-201ENST00000374737 WWC2Q6AWC2 1192 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 C17orf99Q6UX52 265 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 FAM184AQ8NB25 1140 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 ALG1Q9BT22 464 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 MOV10L1Q9BXT6 1211 aaKnown RBP10.44□□□□□ -0.74
VSIG4-201ENST00000374737 TEX13BQ9BXU2 312 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 PORCNQ9H237 461 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 EFCC1Q9HA90 598 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 VPS54Q9P1Q0 977 aa10.44□□□□□ -0.74
VSIG4-201ENST00000374737 BCRP11274 1271 aa10.43□□□□□ -0.74
VSIG4-201ENST00000374737 GUCY1B3Q02153 619 aa10.43□□□□□ -0.74
VSIG4-201ENST00000374737 MUM1L1Q5H9M0 696 aa10.43□□□□□ -0.74
VSIG4-201ENST00000374737 CCAR1Q8IX12 1150 aaKnown RBP10.43□□□□□ -0.74
VSIG4-201ENST00000374737 TBC1D5Q92609 795 aa10.43□□□□□ -0.74
VSIG4-201ENST00000374737 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
VSIG4-201ENST00000374737 ADGRA2Q96PE1 1338 aa10.43□□□□□ -0.74
VSIG4-201ENST00000374737 ERCC3P19447 782 aa10.42□□□□□ -0.74
VSIG4-201ENST00000374737 NAPAP54920 295 aa10.42□□□□□ -0.74
VSIG4-201ENST00000374737 FAM110CQ1W6H9 321 aa10.42□□□□□ -0.74
VSIG4-201ENST00000374737 GTF3C2Q8WUA4 911 aaPredicted RBP10.42□□□□□ -0.74
VSIG4-201ENST00000374737 SHISA4Q96DD7 197 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms