RNA–Protein interactions for RNA: ENST00000374708.8

COL11A2-203, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL11A2, Length 6,209 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-203ENST00000374708 LRFN2Q9ULH4 789 aa16.34■□□□□ 0.21
COL11A2-203ENST00000374708 ZNF804BA4D1E1 1349 aa16.33■□□□□ 0.21
COL11A2-203ENST00000374708 TYW5A2RUC4 315 aaKnown RBP16.33■□□□□ 0.21
COL11A2-203ENST00000374708 ADCY8P40145 1251 aa16.33■□□□□ 0.21
COL11A2-203ENST00000374708 DIXDC1Q155Q3 683 aa16.33■□□□□ 0.21
COL11A2-203ENST00000374708 SCYL1Q96KG9 808 aa16.33■□□□□ 0.21
COL11A2-203ENST00000374708 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.21
COL11A2-203ENST00000374708 PRKAG2Q9UGJ0 569 aa16.33■□□□□ 0.21
COL11A2-203ENST00000374708 GPKOWQ92917 476 aaPredicted RBP eCLIP16.33■□□□□ 0.2
COL11A2-203ENST00000374708 MAST1Q9Y2H9 1570 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 RINT1Q6NUQ1 792 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 SHANK2Q9UPX8 1470 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
COL11A2-203ENST00000374708 PTPREP23469 700 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 USP14P54578 494 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 TM6SF1Q9BZW5 370 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
COL11A2-203ENST00000374708 PRPSAP1Q14558 356 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 SEPT9Q9UHD8 586 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 TRPC5Q9UL62 973 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 XDHP47989 1333 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 TROVE2P10155 538 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 AOC3Q16853 763 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 ADALQ6DHV7 355 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 POMGNT1Q8WZA1 660 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 AKT3Q9Y243 479 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 KIAA0556O60303 1618 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 SYNJ2BP-COX16A0A087WUM0 186 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 A6NJR5 290 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 PFKFB1P16118 471 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 KRT71Q3SY84 523 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 KRBA2Q6ZNG9 492 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 TRIM58Q8NG06 486 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 SKA2Q8WVK7 121 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 KIAA0232Q92628 1395 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 GSTA1P08263 222 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 GSTA2P09210 222 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 XPAP23025 273 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 NXNQ6DKJ4 435 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 METTL23Q86XA0 190 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 MIPOL1Q8TD10 442 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
COL11A2-203ENST00000374708 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
COL11A2-203ENST00000374708 KCNK3O14649 394 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
COL11A2-203ENST00000374708 PPP2R5AQ15172 486 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 SH2D4BQ5SQS7 431 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 ANKRD42Q8N9B4 389 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 MGARPQ8TDB4 240 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 SEMA3EO15041 775 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 RNF8O76064 485 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 STX2P32856 288 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 RBBP5Q15291 538 aaKnown RBP16.31■□□□□ 0.2
COL11A2-203ENST00000374708 PHLDB2Q86SQ0 1253 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 C10orf67Q8IYJ2 551 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 CCDC127Q96BQ5 260 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 PCDHA1Q9Y5I3 950 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 RGS16O15492 202 aaPredicted RBP16.31■□□□□ 0.2
COL11A2-203ENST00000374708 TSNAXIP1Q2TAA8 658 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 KRIT1O00522 736 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 OR8K1Q8NGG5 319 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 JPH2Q9BR39 696 aaPredicted RBP16.31■□□□□ 0.2
COL11A2-203ENST00000374708 CTTNBP2Q8WZ74 1663 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 CLRN2A0PK11 232 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 RNF40O75150 1001 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 PPFIA1Q13136 1202 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 ARMC9Q7Z3E5 817 aa16.31■□□□□ 0.2
COL11A2-203ENST00000374708 ADAM9Q13443 819 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 PPP2R5EQ16537 467 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 CCDC17Q96LX7 622 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 ANAPC5Q9UJX4 755 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 LEMD3Q9Y2U8 911 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 PSDA5PKW4 1024 aaPredicted RBP16.3■□□□□ 0.2
COL11A2-203ENST00000374708 KIF3CO14782 793 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 BUB1BO60566 1050 aaPredicted RBP16.3■□□□□ 0.2
COL11A2-203ENST00000374708 KRT3P12035 628 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 ME3Q16798 604 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 CCDC13Q8IYE1 715 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 CCDC170Q8IYT3 715 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 BBS5Q8N3I7 341 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 CABS1Q96KC9 395 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 DDX41Q9UJV9 622 aaKnown RBP16.3■□□□□ 0.2
COL11A2-203ENST00000374708 SAR1BQ9Y6B6 198 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 WDR17Q8IZU2 1322 aa16.3■□□□□ 0.2
COL11A2-203ENST00000374708 S100BP04271 92 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms