RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 CDC37Q16543 378 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-202ENST00000374607 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 RIOX2Q8IUF8 465 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
PFDN6-202ENST00000374607 PORCNQ9H237 461 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 RANBP17Q9H2T7 1088 aaKnown RBP17.69■□□□□ 0.42
PFDN6-202ENST00000374607 MROH8Q9H579 483 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
PFDN6-202ENST00000374607 SEC63Q9UGP8 760 aaKnown RBP17.69■□□□□ 0.42
PFDN6-202ENST00000374607 ST18O60284 1047 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 ALAS1P13196 640 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 RCAN1P53805 252 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 AK2P54819 239 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 STK3Q13188 491 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-202ENST00000374607 RABEP1Q15276 862 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 CTU1Q7Z7A3 348 aaKnown RBP17.68■□□□□ 0.42
PFDN6-202ENST00000374607 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 RRP36Q96EU6 259 aaKnown RBP17.68■□□□□ 0.42
PFDN6-202ENST00000374607 TRIM47Q96LD4 638 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 TBC1D32Q96NH3 1257 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
PFDN6-202ENST00000374607 ZNF214Q9UL59 606 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-202ENST00000374607 CPLX1O14810 134 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 ATP2A1O14983 1001 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 CAPN15O75808 1086 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 ICAM1P05362 532 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 FCER1AP12319 257 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 CCT2P78371 535 aaKnown RBP17.67■□□□□ 0.42
PFDN6-202ENST00000374607 TRAF1Q13077 416 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 USH1GQ495M9 461 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 CPLX2Q6PUV4 134 aaKnown RBP17.67■□□□□ 0.42
PFDN6-202ENST00000374607 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 REPS2Q8NFH8 660 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 RAET1EQ8TD07 263 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 NUDT12Q9BQG2 462 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
PFDN6-202ENST00000374607 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
PFDN6-202ENST00000374607 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 FBXO40Q9UH90 709 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 PARP14Q460N5 1801 aa17.67■□□□□ 0.42
PFDN6-202ENST00000374607 RLFQ13129 1914 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 COL11A1P12107 1806 aaPredicted RBP17.66■□□□□ 0.42
PFDN6-202ENST00000374607 STRNO43815 780 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 PDIA3P30101 505 aaKnown RBP17.66■□□□□ 0.42
PFDN6-202ENST00000374607 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
PFDN6-202ENST00000374607 KCTD2Q14681 263 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 TKFCQ3LXA3 575 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 FBXO11Q86XK2 927 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
PFDN6-202ENST00000374607 ANKRD35Q8N283 1001 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 DDX11Q96FC9 970 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 ZNF274Q96GC6 653 aaPredicted RBP17.66■□□□□ 0.42
PFDN6-202ENST00000374607 MMP19Q99542 508 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 SLC5A4Q9NY91 659 aa17.66■□□□□ 0.42
PFDN6-202ENST00000374607 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 ZBTB5O15062 677 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 SMARCA1P28370 1054 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 PRMT2P55345 433 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 PKN2Q16513 984 aaKnown RBP17.65■□□□□ 0.42
PFDN6-202ENST00000374607 QRICH1Q2TAL8 776 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 DPP9Q86TI2 863 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
PFDN6-202ENST00000374607 CHST13Q8NET6 341 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 SOCS4Q8WXH5 440 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 PIGSQ96S52 555 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 SPZ1Q9BXG8 430 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 AMNQ9BXJ7 453 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 RIOX1Q9H6W3 641 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 ACAD9Q9H845 621 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 SRRDQ9UH36 339 aa17.65■□□□□ 0.42
PFDN6-202ENST00000374607 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
PFDN6-202ENST00000374607 PRKCZQ05513 592 aa17.64■□□□□ 0.41
PFDN6-202ENST00000374607 IL27Q8NEV9 243 aa17.64■□□□□ 0.41
PFDN6-202ENST00000374607 ABHD8Q96I13 439 aa17.64■□□□□ 0.41
PFDN6-202ENST00000374607 RIPK3Q9Y572 518 aa17.64■□□□□ 0.41
PFDN6-202ENST00000374607 SLC15A5A6NIM6 579 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 CYP2B6P20813 491 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 PTPREP23469 700 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 CTGFP29279 349 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 CDC27P30260 824 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
PFDN6-202ENST00000374607 RGS2P41220 211 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 EVCP57679 992 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 NBPF11Q86T75 865 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 NCOA5Q9HCD5 579 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms