RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 STXBP3O00186 592 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 TRAK2O60296 914 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 PEX10O60683 326 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
C9orf43-202ENST00000374165 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 WASF1Q92558 559 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 PTPN18Q99952 460 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 BARHL2Q9NY43 387 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 KIF3AQ9Y496 699 aa20.24■□□□□ 0.83
C9orf43-202ENST00000374165 FAM155AB1AL88 458 aaPredicted RBP20.23■□□□□ 0.83
C9orf43-202ENST00000374165 COG2Q14746 738 aa20.23■□□□□ 0.83
C9orf43-202ENST00000374165 NPY5RQ15761 445 aa20.23■□□□□ 0.83
C9orf43-202ENST00000374165 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
C9orf43-202ENST00000374165 CCDC174Q6PII3 467 aa20.23■□□□□ 0.83
C9orf43-202ENST00000374165 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
C9orf43-202ENST00000374165 RANBP17Q9H2T7 1088 aaKnown RBP20.23■□□□□ 0.83
C9orf43-202ENST00000374165 RBM27Q9P2N5 1060 aaKnown RBP20.23■□□□□ 0.83
C9orf43-202ENST00000374165 AGTPBP1Q9UPW5 1226 aa20.23■□□□□ 0.83
C9orf43-202ENST00000374165 ZNF536O15090 1300 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 H3BQV1 296 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
C9orf43-202ENST00000374165 GTF2A2P52657 109 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 CCL15-CCL14A0A0B4J2E2 113 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 SPDYE16A6NNV3 312 aaPredicted RBP20.22■□□□□ 0.83
C9orf43-202ENST00000374165 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 VWA5AO00534 786 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 CCL15Q16663 113 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 USH1GQ495M9 461 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 FASTKD5Q7L8L6 764 aaKnown RBP20.22■□□□□ 0.83
C9orf43-202ENST00000374165 ZIC5Q96T25 663 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 P2RX7Q99572 595 aaKnown RBP20.22■□□□□ 0.83
C9orf43-202ENST00000374165 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 SLC38A10Q9HBR0 1119 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 ADAMTS5Q9UNA0 930 aa20.22■□□□□ 0.83
C9orf43-202ENST00000374165 ZSCAN22P10073 491 aaPredicted RBP20.21■□□□□ 0.83
C9orf43-202ENST00000374165 DSG3P32926 999 aa20.21■□□□□ 0.83
C9orf43-202ENST00000374165 OXER1Q8TDS5 423 aa20.21■□□□□ 0.83
C9orf43-202ENST00000374165 AGBL1Q96MI9 1066 aa20.21■□□□□ 0.83
C9orf43-202ENST00000374165 ASCC2Q9H1I8 757 aaPredicted RBP20.21■□□□□ 0.83
C9orf43-202ENST00000374165 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
C9orf43-202ENST00000374165 TCHHQ07283 1943 aa20.21■□□□□ 0.83
C9orf43-202ENST00000374165 BTBD19C9JJ37 291 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 MMP1P03956 469 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 SLC10A3P09131 477 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 CETPP11597 493 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 GSE1Q14687 1217 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 CPXCR1Q8N123 301 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.83
C9orf43-202ENST00000374165 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
C9orf43-202ENST00000374165 PTMSP20962 102 aa20.2■□□□□ 0.82
C9orf43-202ENST00000374165 GRM1Q13255 1194 aa20.2■□□□□ 0.82
C9orf43-202ENST00000374165 FOXD4L6Q3SYB3 417 aaPredicted RBP20.2■□□□□ 0.82
C9orf43-202ENST00000374165 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
C9orf43-202ENST00000374165 FAM173BQ6P4H8 233 aa20.2■□□□□ 0.82
C9orf43-202ENST00000374165 FOXD4L3Q6VB84 417 aaPredicted RBP20.2■□□□□ 0.82
C9orf43-202ENST00000374165 RAVER2Q9HCJ3 691 aaKnown RBP20.2■□□□□ 0.82
C9orf43-202ENST00000374165 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 CYP2C8P10632 490 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 NAPAP54920 295 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 HTRA3P83110 453 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 NR5A1Q13285 461 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 TRIM29Q14134 588 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 FBXO11Q86XK2 927 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 REPS2Q8NFH8 660 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 AMNQ9BXJ7 453 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 HOXC10Q9NYD6 342 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 APLP1P51693 650 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
C9orf43-202ENST00000374165 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
C9orf43-202ENST00000374165 PDHXO00330 501 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 OPLAHO14841 1288 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 F13A1P00488 732 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 NLRP5P59047 1200 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 TMEM132BQ14DG7 1078 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 ZMYND12Q9H0C1 365 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
C9orf43-202ENST00000374165 RIPK3Q9Y572 518 aa20.18■□□□□ 0.82
C9orf43-202ENST00000374165 SMCO2A6NFE2 343 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 XBP1P17861 261 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 IRX3P78415 501 aaPredicted RBP20.17■□□□□ 0.82
C9orf43-202ENST00000374165 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
C9orf43-202ENST00000374165 DIS3L2Q8IYB7 885 aaKnown RBP20.17■□□□□ 0.82
C9orf43-202ENST00000374165 HHIPL1Q96JK4 782 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 ICAM1P05362 532 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 DEKP35659 375 aaKnown RBP20.17■□□□□ 0.82
C9orf43-202ENST00000374165 HERVK_113P62684 666 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 EARS2Q5JPH6 523 aaKnown RBP20.17■□□□□ 0.82
C9orf43-202ENST00000374165 PAXIP1Q6ZW49 1069 aaPredicted RBP20.17■□□□□ 0.82
C9orf43-202ENST00000374165 RASGRP4Q8TDF6 673 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 BTBD7Q9P203 1132 aa20.17■□□□□ 0.82
C9orf43-202ENST00000374165 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
C9orf43-202ENST00000374165 IGF2BP3O00425 579 aaKnown RBP eCLIP20.16■□□□□ 0.82
C9orf43-202ENST00000374165 RESTQ13127 1097 aa20.16■□□□□ 0.82
C9orf43-202ENST00000374165 TBC1D5Q92609 795 aa20.16■□□□□ 0.82
C9orf43-202ENST00000374165 CCDC102AQ96A19 550 aa20.16■□□□□ 0.82
C9orf43-202ENST00000374165 TXNRD2Q9NNW7 524 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms