RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 TESPA1A2RU30 521 aaPredicted RBP16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 FAM155AB1AL88 458 aaPredicted RBP16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 PPP1R11O60927 126 aaPredicted RBP16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 XBP1P17861 261 aa16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 GPKOWQ92917 476 aaPredicted RBP eCLIP16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 SHISA4Q96DD7 197 aa16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 SLC38A10Q9HBR0 1119 aa16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 HOXC10Q9NYD6 342 aa16.88■□□□□ 0.29
SMPDL3B-201ENST00000373888 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 STXBP3O00186 592 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 VWA5AO00534 786 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 PKP1Q13835 747 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 TRIM29Q14134 588 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 KRT40Q6A162 431 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 ANKRD23Q86SG2 305 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 GJB4Q9NTQ9 266 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 VPS54Q9P1Q0 977 aa16.87■□□□□ 0.29
SMPDL3B-201ENST00000373888 MANSC4A6NHS7 340 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 RASSF10A6NK89 507 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 H3BQV1 296 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 BRD1O95696 1058 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 MCM4P33991 863 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 FOSBP53539 338 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 SNAP25P60880 206 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 IRX3P78415 501 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 TYW1BQ6NUM6 668 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 PPP1R18Q6NYC8 613 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 LBX2Q6XYB7 198 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 REPS2Q8NFH8 660 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 AMNQ9BXJ7 453 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 A0A0G2JMZ2 1700 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 BTBD19C9JJ37 291 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 ZBED4O75132 1171 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 ICAM1P05362 532 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 OSBPP22059 807 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 TRAF1Q13077 416 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 CLEC17AQ6ZS10 378 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 CCDC148Q8NFR7 591 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 CCDC12Q8WUD4 166 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 PHF20Q9BVI0 1012 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 PNMA3Q9UL41 463 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 PNMA2Q9UL42 364 aa16.86■□□□□ 0.29
SMPDL3B-201ENST00000373888 ZNF536O15090 1300 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 ESYT2A0FGR8 921 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 MMP1P03956 469 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 OAZ1P54368 228 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 NAPAP54920 295 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 CCDC174Q6PII3 467 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 MB21D1Q8N884 522 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 COA7Q96BR5 231 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 P2RX7Q99572 595 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 PTPN18Q99952 460 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 ZDHHC9Q9Y397 364 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 PCDHA1Q9Y5I3 950 aa16.85■□□□□ 0.29
SMPDL3B-201ENST00000373888 PDHXO00330 501 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 ATP2A1O14983 1001 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 INHBEP58166 350 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 HERVK_113P62684 666 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 GUCY1B3Q02153 619 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 NPY5RQ15761 445 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 DEFB115Q30KQ5 88 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 FAM43AQ8N2R8 423 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 TNPO1Q92973 898 aaKnown RBP16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 ZMYND12Q9H0C1 365 aa16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 ZCCHC17Q9NP64 241 aaKnown RBP16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
SMPDL3B-201ENST00000373888 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 CALML3P27482 149 aa16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 CYP4F22Q6NT55 531 aa16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 POTEEQ6S8J3 1075 aa16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 DAGLBQ8NCG7 672 aa16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 GTF3C2Q8WUA4 911 aaPredicted RBP16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
SMPDL3B-201ENST00000373888 ABCB11O95342 1321 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 NLRP5P59047 1200 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 SREBF2Q12772 1141 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 TMEM132BQ14DG7 1078 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 USH1GQ495M9 461 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 PAXIP1Q6ZW49 1069 aaPredicted RBP16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 CCPG1Q9ULG6 757 aa16.82■□□□□ 0.28
SMPDL3B-201ENST00000373888 SMCO2A6NFE2 343 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 F13A1P00488 732 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 GNA11P29992 359 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 KIF23Q02241 960 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms