RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 PCDHA1Q9Y5I3 950 aa8.73□□□□□ -1.01
HERC4-202ENST00000373700 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 KRT86O43790 486 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 PPP1R12BO60237 982 aaPredicted RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 GH2P01242 217 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 MYCLP12524 364 aaPredicted RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 MORC3Q14149 939 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 KCNJ12Q14500 433 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 IQCB1Q15051 598 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 ABCB5Q2M3G0 1257 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 HERC4Q5GLZ8 1057 aaPredicted RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 PRAMEF18Q5VWM3 479 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 COA1Q9GZY4 146 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■■■ 140.1
HERC4-202ENST00000373700 AKR1B1P15121 316 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 R3HDM1Q15032 1099 aaKnown RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 CALCRLQ16602 461 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 PLA2G4DQ86XP0 818 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 DHX40Q8IX18 779 aaKnown RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 GBP3Q9H0R5 595 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 TSPYL1Q9H0U9 437 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 BCCIPQ9P287 314 aaKnown RBP eCLIP8.72□□□□□ -1.01
HERC4-202ENST00000373700 SETD1AO15047 1707 aaKnown RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 PP2D1A8MPX8 630 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 H0YHG0 523 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 DDR1Q08345 913 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 SEPT2Q15019 361 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 PRR16Q569H4 304 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 SPATA1Q5VX52 437 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 IQCEQ6IPM2 695 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 VGLL2Q8N8G2 317 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 ALDH8A1Q9H2A2 487 aaPredicted RBP8.72□□□□□ -1.01
HERC4-202ENST00000373700 PSTPIP2Q9H939 334 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 OGFRQ9NZT2 677 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 GDAQ9Y2T3 454 aa8.72□□□□□ -1.01
HERC4-202ENST00000373700 MROH7-TTC4A0A0A0MT08 1334 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 RPN1P04843 607 aaKnown RBP8.71□□□□□ -1.01
HERC4-202ENST00000373700 HOXA13P31271 388 aaPredicted RBP8.71□□□□□ -1.01
HERC4-202ENST00000373700 RAPGEF1Q13905 1077 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 NEK11Q8NG66 645 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 ALS2CR12Q96Q35 445 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 FAM107BQ9H098 131 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 EPC1Q9H2F5 836 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 RABEP2Q9H5N1 569 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.01
HERC4-202ENST00000373700 SLIT3O75094 1523 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 BICDL2A1A5D9 508 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 ENC1O14682 589 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 SLFN14P0C7P3 912 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 PTPREP23469 700 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 RBL2Q08999 1139 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 LRRC41Q15345 812 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 TTBK2Q6IQ55 1244 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 KCNB2Q92953 911 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 CWC15Q9P013 229 aaKnown RBP8.71□□□□□ -1.02
HERC4-202ENST00000373700 VPS18Q9P253 973 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 SRPRBQ9Y5M8 271 aaKnown RBP8.71□□□□□ -1.02
HERC4-202ENST00000373700 DDAH1O94760 285 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 ALAS1P13196 640 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 NFIAQ12857 509 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 RESP18Q5W5W9 173 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 KRT25Q7Z3Z0 450 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 TAX1BP1Q86VP1 789 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 TBCKQ8TEA7 893 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 PAGE5Q96GU1 130 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 TMEM260Q9NX78 707 aa8.71□□□□□ -1.02
HERC4-202ENST00000373700 GOLGA6L10A6NI86 522 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 KRT83P78385 493 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TNIP1Q15025 636 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
HERC4-202ENST00000373700 C12orf60Q5U649 245 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TMTC3Q6ZXV5 915 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 METTL16Q86W50 562 aaKnown RBP8.7□□□□□ -1.02
HERC4-202ENST00000373700 ADAMTSL3P82987 1691 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L15C9J2P7 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L13C9JLJ4 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L11C9JVI0 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L18D6R9N7 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L22D6RA61 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L17D6RBQ6 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L19D6RCP7 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L20D6RJB6 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 IKBKBO14920 756 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TACC1O75410 805 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 SEC31AO94979 1220 aaKnown RBP8.7□□□□□ -1.02
HERC4-202ENST00000373700 KIF20AO95235 890 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TTLL1O95922 423 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L24Q0WX57 530 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 USP17L6PQ6QN14 398 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 CYP26C1Q6V0L0 522 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 ACRBPQ8NEB7 543 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 ERMNQ8TAM6 284 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TIGD1Q96MW7 591 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms