RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 CCDC12Q8WUD4 166 aaPredicted RBP18.83■□□□□ 0.61
HDAC8-206ENST00000373571 PLIN2Q99541 437 aa18.83■□□□□ 0.61
HDAC8-206ENST00000373571 MYH1P12882 1939 aa18.83■□□□□ 0.61
HDAC8-206ENST00000373571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.6
HDAC8-206ENST00000373571 PLCG2P16885 1265 aa18.83■□□□□ 0.6
HDAC8-206ENST00000373571 CRY2Q49AN0 593 aa18.83■□□□□ 0.6
HDAC8-206ENST00000373571 ADSSL1Q8N142 457 aa18.83■□□□□ 0.6
HDAC8-206ENST00000373571 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.6
HDAC8-206ENST00000373571 FAM53CQ9NYF3 392 aa18.83■□□□□ 0.6
HDAC8-206ENST00000373571 MYH8P13535 1937 aa18.83■□□□□ 0.6
HDAC8-206ENST00000373571 TRIM49BA6NDI0 452 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 H7C1D1 291 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 MYL1P05976 194 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 ADRA2BP18089 450 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 FECHP22830 423 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 ST5P78524 1137 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 PPP2R3AQ06190 1150 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 KCNB1Q14721 858 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 MFSD14BQ5SR56 506 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 UTP14CQ5TAP6 766 aaKnown RBP18.82■□□□□ 0.6
HDAC8-206ENST00000373571 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 RBM17Q96I25 401 aaKnown RBP18.82■□□□□ 0.6
HDAC8-206ENST00000373571 IRX2Q9BZI1 471 aaPredicted RBP18.82■□□□□ 0.6
HDAC8-206ENST00000373571 TRIM14Q14142 442 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 KRT25Q7Z3Z0 450 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 RRP36Q96EU6 259 aaKnown RBP18.82■□□□□ 0.6
HDAC8-206ENST00000373571 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
HDAC8-206ENST00000373571 C6orf50Q9HD87 102 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 ABHD10Q9NUJ1 306 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 KBTBD4Q9NVX7 518 aa18.82■□□□□ 0.6
HDAC8-206ENST00000373571 ARGLU1Q9NWB6 273 aaPredicted RBP18.82■□□□□ 0.6
HDAC8-206ENST00000373571 A0A0U1RQJ8 604 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 SMCO2A6NFE2 343 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 KLRC4O43908 158 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 RHBDL3P58872 404 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 NONOQ15233 471 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDAC8-206ENST00000373571 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 ATRIPQ8WXE1 791 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
HDAC8-206ENST00000373571 SEC63Q9UGP8 760 aaKnown RBP18.81■□□□□ 0.6
HDAC8-206ENST00000373571 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 CCNT1O60563 726 aaKnown RBP18.8■□□□□ 0.6
HDAC8-206ENST00000373571 OR52Z1P0C646 297 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 GNA11P29992 359 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 UBXN1Q04323 297 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 TMTC1Q8IUR5 882 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 SLF2Q8IX21 1173 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 AK8Q96MA6 479 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 KIF5CO60282 957 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 RHOBTB3O94955 611 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 SERPINB2P05120 415 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 GYS1P13807 737 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 STIM1Q13586 685 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 CABP7Q86V35 215 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 LRRC15Q8TF66 581 aa18.8■□□□□ 0.6
HDAC8-206ENST00000373571 FAM163AQ96GL9 167 aaPredicted RBP18.8■□□□□ 0.6
HDAC8-206ENST00000373571 GAKO14976 1311 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 RNF225M0QZC1 329 aaPredicted RBP18.79■□□□□ 0.6
HDAC8-206ENST00000373571 PLCG1P19174 1290 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 PMS1P54277 932 aaKnown RBP18.79■□□□□ 0.6
HDAC8-206ENST00000373571 ERVK-24P63145 666 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 BMS1Q14692 1282 aaKnown RBP18.79■□□□□ 0.6
HDAC8-206ENST00000373571 SOGA3Q5TF21 947 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 GIMAP8Q8ND71 665 aaPredicted RBP18.79■□□□□ 0.6
HDAC8-206ENST00000373571 CUEDC2Q9H467 287 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 POLLQ9UGP5 575 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 SEMA3FQ13275 785 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 NEK8Q86SG6 692 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 ACRBPQ8NEB7 543 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 TBC1D16Q8TBP0 767 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 TBC1D22AQ8WUA7 517 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 PIGSQ96S52 555 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 MAGEF1Q9HAY2 307 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 PRDM4Q9UKN5 801 aa18.79■□□□□ 0.6
HDAC8-206ENST00000373571 TTF2Q9UNY4 1162 aaKnown RBP18.79■□□□□ 0.6
HDAC8-206ENST00000373571 PSMA7O14818 248 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 BBOX1O75936 387 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 SMARCA1P28370 1054 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 TMCO3Q6UWJ1 677 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 TRIM47Q96LD4 638 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 THAP9Q9H5L6 903 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 PODXL2Q9NZ53 605 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 FOCADQ5VW36 1801 aa18.78■□□□□ 0.6
HDAC8-206ENST00000373571 USP17L5A8MUK1 530 aa18.77■□□□□ 0.6
HDAC8-206ENST00000373571 EEF1GP26641 437 aaKnown RBP18.77■□□□□ 0.6
HDAC8-206ENST00000373571 KRT9P35527 623 aa18.77■□□□□ 0.6
HDAC8-206ENST00000373571 GABPB1Q06547 395 aaPredicted RBP18.77■□□□□ 0.6
HDAC8-206ENST00000373571 TEX35Q5T0J7 233 aa18.77■□□□□ 0.6
HDAC8-206ENST00000373571 RSRC2Q7L4I2 434 aaKnown RBP18.77■□□□□ 0.6
HDAC8-206ENST00000373571 FHOD1Q9Y613 1164 aa18.77■□□□□ 0.6
HDAC8-206ENST00000373571 NOVP48745 357 aa18.77■□□□□ 0.6
HDAC8-206ENST00000373571 MB21D1Q8N884 522 aa18.77■□□□□ 0.6
HDAC8-206ENST00000373571 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
HDAC8-206ENST00000373571 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms